RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 NKRFO15226 690 aaKnown RBP eCLIP24.13■■□□□ 1.45
ETFA-213ENST00000560309 PARP1P09874 1014 aaKnown RBP24.13■■□□□ 1.45
ETFA-213ENST00000560309 ITGB8P26012 769 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 CALML3P27482 149 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 RPS6P62753 249 aaKnown RBP24.13■■□□□ 1.45
ETFA-213ENST00000560309 BRDTQ58F21 947 aaPredicted RBP24.13■■□□□ 1.45
ETFA-213ENST00000560309 C9orf50Q5SZB4 431 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 MFSD5Q6N075 450 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 EEPD1Q7L9B9 569 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 FBXO16Q8IX29 292 aaPredicted RBP24.13■■□□□ 1.45
ETFA-213ENST00000560309 ENAHQ8N8S7 591 aaPredicted RBP24.13■■□□□ 1.45
ETFA-213ENST00000560309 SLC43A3Q8NBI5 491 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 PDGFCQ9NRA1 345 aa24.13■■□□□ 1.45
ETFA-213ENST00000560309 ABCB11O95342 1321 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 BEX3Q00994 111 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 ZNF697Q5TEC3 545 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 Q7L0L9 218 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 MCF2L2Q86YR7 1114 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 FAM126BQ8IXS8 530 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 TMEM199Q8N511 208 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 WDR11Q9BZH6 1224 aa24.12■■□□□ 1.45
ETFA-213ENST00000560309 U3KPZ7 1027 aaPredicted RBP24.12■■□□□ 1.45
ETFA-213ENST00000560309 TNKSO95271 1327 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 GOLGA8HP0CJ92 632 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 PDE4AP27815 886 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 IRX5P78411 483 aaPredicted RBP24.11■■□□□ 1.45
ETFA-213ENST00000560309 PDE4DQ08499 809 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 PPIGQ13427 754 aaKnown RBP eCLIP24.11■■□□□ 1.453e-7■□□□□ 10.5
ETFA-213ENST00000560309 CXCL17Q6UXB2 119 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 UBA5Q9GZZ9 404 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 POLR3EQ9NVU0 708 aa24.11■■□□□ 1.45
ETFA-213ENST00000560309 GSPT1P15170 499 aaKnown RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 EDNRBP24530 442 aa24.1■■□□□ 1.45
ETFA-213ENST00000560309 CPT1AP50416 773 aa24.1■■□□□ 1.45
ETFA-213ENST00000560309 ITGA7Q13683 1181 aa24.1■■□□□ 1.45
ETFA-213ENST00000560309 CDC37Q16543 378 aaPredicted RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 IFIT1BQ5T764 474 aaKnown RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 ADGRF4Q8IZF3 695 aa24.1■■□□□ 1.45
ETFA-213ENST00000560309 SLC17A8Q8NDX2 589 aa24.1■■□□□ 1.45
ETFA-213ENST00000560309 RNPC3Q96LT9 517 aaKnown RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 PURBQ96QR8 312 aaKnown RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 MRPL11Q9Y3B7 192 aaKnown RBP24.1■■□□□ 1.45
ETFA-213ENST00000560309 KPNA6O60684 536 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 CD4P01730 458 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 TRAF1Q13077 416 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 SLC30A10Q6XR72 485 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 SCFD2Q8WU76 684 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 LCTP09848 1927 aa24.09■■□□□ 1.45
ETFA-213ENST00000560309 TMEM265A0A087WTH1 108 aa24.08■■□□□ 1.45
ETFA-213ENST00000560309 CHMLP26374 656 aa24.08■■□□□ 1.45
ETFA-213ENST00000560309 USH1GQ495M9 461 aa24.08■■□□□ 1.45
ETFA-213ENST00000560309 MAP3K20Q9NYL2 800 aaKnown RBP24.08■■□□□ 1.45
ETFA-213ENST00000560309 LRRC37A2A6NM11 1700 aa24.07■■□□□ 1.44
ETFA-213ENST00000560309 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.07■■□□□ 1.44
ETFA-213ENST00000560309 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.07■■□□□ 1.44
ETFA-213ENST00000560309 DHX16O60231 1041 aaKnown RBP24.07■■□□□ 1.44
ETFA-213ENST00000560309 FBXO11Q86XK2 927 aa24.07■■□□□ 1.44
ETFA-213ENST00000560309 SAMD3Q8N6K7 520 aa24.07■■□□□ 1.44
ETFA-213ENST00000560309 NSUN6Q8TEA1 469 aaKnown RBP24.07■■□□□ 1.44
ETFA-213ENST00000560309 IWS1Q96ST2 819 aa24.07■■□□□ 1.44
ETFA-213ENST00000560309 GPHNQ9NQX3 736 aaPredicted RBP24.07■■□□□ 1.44
ETFA-213ENST00000560309 ERICH2A1L162 156 aa24.06■■□□□ 1.44
ETFA-213ENST00000560309 SUPT20HL2P0C7V6 817 aa24.06■■□□□ 1.44
ETFA-213ENST00000560309 TTLL4Q14679 1199 aa24.06■■□□□ 1.44
ETFA-213ENST00000560309 PPP2R5BQ15173 497 aa24.06■■□□□ 1.44
ETFA-213ENST00000560309 AMNQ9BXJ7 453 aa24.06■■□□□ 1.44
ETFA-213ENST00000560309 EPHB4P54760 987 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 SART3Q15020 963 aaKnown RBP24.05■■□□□ 1.44
ETFA-213ENST00000560309 SEC23AQ15436 765 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 QRICH1Q2TAL8 776 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 PSRC1Q6PGN9 363 aaPredicted RBP24.05■■□□□ 1.44
ETFA-213ENST00000560309 OR6J1Q8NGC5 347 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 SEMA6BQ9H3T3 888 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 JMJD4Q9H9V9 463 aa24.05■■□□□ 1.44
ETFA-213ENST00000560309 DDX49Q9Y6V7 483 aaKnown RBP24.05■■□□□ 1.44
ETFA-213ENST00000560309 RALYLQ86SE5 291 aaKnown RBP24.04■■□□□ 1.44
ETFA-213ENST00000560309 NCOA7Q8NI08 942 aa24.04■■□□□ 1.44
ETFA-213ENST00000560309 MTG1Q9BT17 334 aaPredicted RBP24.04■■□□□ 1.44
ETFA-213ENST00000560309 IL25Q9H293 177 aa24.04■■□□□ 1.44
ETFA-213ENST00000560309 CPVLQ9H3G5 476 aa24.04■■□□□ 1.44
ETFA-213ENST00000560309 VAT1LQ9HCJ6 419 aa24.04■■□□□ 1.44
ETFA-213ENST00000560309 KLRF2D3W0D1 207 aa24.03■■□□□ 1.44
ETFA-213ENST00000560309 SGSM2O43147 1006 aa24.03■■□□□ 1.44
ETFA-213ENST00000560309 CYP21A2P08686 494 aa24.03■■□□□ 1.44
ETFA-213ENST00000560309 TXNP10599 105 aaKnown RBP24.03■■□□□ 1.44
ETFA-213ENST00000560309 STXBP2Q15833 593 aa24.03■■□□□ 1.44
ETFA-213ENST00000560309 SYTL5Q8TDW5 730 aaPredicted RBP24.03■■□□□ 1.44
ETFA-213ENST00000560309 MTIF3Q9H2K0 278 aaKnown RBP24.03■■□□□ 1.44
ETFA-213ENST00000560309 GRIN2DO15399 1336 aa24.03■■□□□ 1.44
ETFA-213ENST00000560309 MYH6P13533 1939 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 PALM3A6NDB9 673 aaPredicted RBP24.02■■□□□ 1.44
ETFA-213ENST00000560309 A6NJR5 290 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 PURAQ00577 322 aaKnown RBP24.02■■□□□ 1.44
ETFA-213ENST00000560309 RPUSD2Q8IZ73 545 aaKnown RBP24.02■■□□□ 1.44
ETFA-213ENST00000560309 GUCD1Q96NT3 240 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 RMDN3Q96TC7 470 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.02■■□□□ 1.442e-9■□□□□ 10.6
ETFA-213ENST00000560309 PPP1R12CQ9BZL4 782 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 HIPK3Q9H422 1215 aa24.02■■□□□ 1.44
ETFA-213ENST00000560309 IL23AQ9NPF7 189 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms