RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CTAGE5O15320 804 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 PGK1P00558 417 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 HSPA4P34932 840 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 USH1GQ495M9 461 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 IQSEC1Q6DN90 963 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 RNF180Q86T96 592 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 ZHX1Q9UKY1 873 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-213ENST00000560175 Q9Y3F1 56 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 SYNRGQ9UMZ2 1314 aa15.37■□□□□ 0.05
SMAD3-213ENST00000560175 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 KBTBD13C9JR72 458 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 TRAF1Q13077 416 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 KRT32Q14532 448 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 SLC39A5Q6ZMH5 540 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
SMAD3-213ENST00000560175 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 FBXL16Q8N461 479 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 SYTL5Q8TDW5 730 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-213ENST00000560175 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
SMAD3-213ENST00000560175 KIAA1217Q5T5P2 1943 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-213ENST00000560175 MOXD2PA6NHM9 499 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 CALM1P0DP23 149 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 CALM2P0DP24 149 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 CALM3P0DP25 149 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 CALML3P27482 149 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 KIF5BP33176 963 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 ADCYAP1R1P41586 468 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 HSD17B4P51659 736 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 TNFAIP2Q03169 654 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-213ENST00000560175 PIGSQ96S52 555 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 COL20A1Q9P218 1284 aa15.35■□□□□ 0.05
SMAD3-213ENST00000560175 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SMAD3-213ENST00000560175 REC8O95072 547 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 HMGB1P09429 215 aaKnown RBP15.34■□□□□ 0.05
SMAD3-213ENST00000560175 GNAQP50148 359 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 TAAR1Q96RJ0 339 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 GDF15Q99988 308 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 COLQQ9Y215 455 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-213ENST00000560175 PCDHA1Q9Y5I3 950 aa15.34■□□□□ 0.05
SMAD3-213ENST00000560175 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 CCDC69A6NI79 296 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 SMPD1P17405 629 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 BMP8BP34820 402 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 ACLYP53396 1101 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 KCNA10Q16322 511 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 DUSP28Q4G0W2 176 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 C7orf61Q8IZ16 206 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 SRBD1Q8N5C6 995 aaKnown RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 FANCBQ8NB91 859 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 PCSK9Q8NBP7 692 aaKnown RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
SMAD3-213ENST00000560175 NUP133Q8WUM0 1156 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 MYL10Q9BUA6 226 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 AGXT2Q9BYV1 514 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 SNX14Q9Y5W7 946 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 SLC12A7Q9Y666 1083 aa15.33■□□□□ 0.04
SMAD3-213ENST00000560175 A0A1W2PQ45 241 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-213ENST00000560175 A0A1W2PQY0 241 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 B4DLN1 442 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 CDK7P50613 346 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
SMAD3-213ENST00000560175 RCAN1P53805 252 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 RTP1P59025 263 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 HABP4Q5JVS0 413 aaKnown RBP15.32■□□□□ 0.04
SMAD3-213ENST00000560175 TMEM63BQ5T3F8 832 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 APOA5Q6Q788 366 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-213ENST00000560175 MPHOSPH6Q99547 160 aaKnown RBP15.32■□□□□ 0.04
SMAD3-213ENST00000560175 USP26Q9BXU7 913 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 SPC25Q9HBM1 224 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 ELP1O95163 1332 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 TRIOBPQ9H2D6 2365 aa15.32■□□□□ 0.04
SMAD3-213ENST00000560175 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 ASGR1P07306 291 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-213ENST00000560175 FUT2Q10981 343 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 CCDC62Q6P9F0 684 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 NFXL1Q6ZNB6 911 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 EEPD1Q7L9B9 569 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 FERMT2Q96AC1 680 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 WDR11Q9BZH6 1224 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
SMAD3-213ENST00000560175 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms