RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 CAAP1Q9H8G2 361 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 PRDM10Q9NQV6 1147 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 KLHL3Q9UH77 587 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 ADGRB1O14514 1584 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 FRMPD1Q5SYB0 1578 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 ZCCHC11Q5TAX3 1644 aaKnown RBP6.17□□□□□ -1.42
TPM1-222ENST00000560131 RTL1A6NKG5 1358 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 ARHGAP5Q13017 1502 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 LMTK2Q8IWU2 1503 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.16□□□□□ -1.42
TPM1-222ENST00000560131 A0A087X0B3 334 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 GOLGA6L6A8MZA4 724 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 PLD2O14939 933 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 REC8O95072 547 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 CTSBP07858 339 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 SLFN14P0C7P3 912 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 RAG1P15918 1043 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 EXOSC9Q06265 439 aaKnown RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 RING1Q06587 406 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 BBS9Q3SYG4 887 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 FNDC3BQ53EP0 1204 aaKnown RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 DNTTIP2Q5QJE6 756 aaKnown RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 TTC22Q5TAA0 569 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 TXNDC11Q6PKC3 985 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 CASC1Q6TDU7 716 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 KISS1RQ969F8 398 aaPredicted RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 ACSF2Q96CM8 615 aaPredicted RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 WDR89Q96FK6 387 aaPredicted RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 DHRS1Q96LJ7 313 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 PLEKHF1Q96S99 279 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 DHRS4Q9BTZ2 278 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 SLC52A1Q9NWF4 448 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 CALCOCO1Q9P1Z2 691 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 CTNNA3Q9UI47 895 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 NOB1Q9ULX3 412 aaKnown RBP6.16□□□□□ -1.42
TPM1-222ENST00000560131 PAXBP1Q9Y5B6 917 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 ABCC4O15439 1325 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 PNPLA6Q8IY17 1366 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 FAM135BQ49AJ0 1406 aa6.16□□□□□ -1.42
TPM1-222ENST00000560131 ADGRB3O60242 1522 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 FAM86C2PA6NEL3 165 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 SMTNL1A8MU46 457 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 NAT2P11245 290 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 POU3F3P20264 500 aaPredicted RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 L1CAMP32004 1257 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 SOX5P35711 763 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 TMPOP42166 694 aaKnown RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 EVA1CP58658 441 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 EXOSC10Q01780 885 aaKnown RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 CBX2Q14781 532 aaPredicted RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 SV2CQ496J9 727 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 ODR4Q5SWX8 454 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 CCDC183Q5T5S1 534 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 FOXB2Q5VYV0 432 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 C20orf204Q6ZNR8 217 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 FMNL3Q8IVF7 1028 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 MCATQ8IVS2 390 aaKnown RBP6.15□□□□□ -1.42
TPM1-222ENST00000560131 KLHL23Q8NBE8 558 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 JDP2Q8WYK2 163 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 KLHDC7BQ96G42 594 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 TIGD1Q96MW7 591 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 NACC1Q96RE7 527 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 DCTPP1Q9H773 170 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 CSADQ9Y600 493 aa6.15□□□□□ -1.42
TPM1-222ENST00000560131 PPLO60437 1756 aa6.15□□□□□ -1.43
TPM1-222ENST00000560131 GLI2P10070 1586 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 A0A1W2PQU0 124 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 PRAMEF27A3QJZ7 478 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 ALG1L2C9J202 215 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 IRS4O14654 1257 aaPredicted RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 MX1P20591 662 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 PMLP29590 882 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 MTHFSP49914 203 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 CDKN1CP49918 316 aaPredicted RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 PMS1P54277 932 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 YARSP54577 528 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 NFKB2Q00653 900 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 NCBP1Q09161 790 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 TERF2Q15554 542 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 ANKRD45Q5TZF3 282 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 DDX42Q86XP3 938 aaKnown RBP eCLIP6.14□□□□□ -1.43
TPM1-222ENST00000560131 SCUBE1Q8IWY4 988 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 SLFN12Q8IYM2 578 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 EXOC2Q96KP1 924 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 CDC6Q99741 560 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 APBA2Q99767 749 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 FUCA2Q9BTY2 467 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 YY1AP1Q9H869 796 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 NCOA5Q9HCD5 579 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 JPH1Q9HDC5 661 aaPredicted RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 KCND1Q9NSA2 647 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 HIF3AQ9Y2N7 669 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms