RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PURBQ96QR8 312 aaKnown RBP19.48■□□□□ 0.71
RPL28-209ENST00000560055 RNF208Q9H0X6 261 aa19.48■□□□□ 0.71
RPL28-209ENST00000560055 HMX1Q9NP08 348 aaPredicted RBP19.48■□□□□ 0.71
RPL28-209ENST00000560055 SEC63Q9UGP8 760 aaKnown RBP19.48■□□□□ 0.71
RPL28-209ENST00000560055 SYNGAP1Q96PV0 1343 aa19.48■□□□□ 0.71
RPL28-209ENST00000560055 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 GJB1P08034 283 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 AK2P54819 239 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 NTRK3Q16288 839 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 MCF2L2Q86YR7 1114 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 TBC1D5Q92609 795 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 LARP6Q9BRS8 491 aaKnown RBP19.47■□□□□ 0.71
RPL28-209ENST00000560055 TMEM106CQ9BVX2 250 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 BACH2Q9BYV9 841 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.47■□□□□ 0.712e-28■■■■■ 30.3
RPL28-209ENST00000560055 NRBP1Q9UHY1 535 aa19.47■□□□□ 0.71
RPL28-209ENST00000560055 hCG_1642624A0A1W2PR95 340 aa19.46■□□□□ 0.71
RPL28-209ENST00000560055 SNAI1O95863 264 aaPredicted RBP19.46■□□□□ 0.71
RPL28-209ENST00000560055 CCND3P30281 292 aaPredicted RBP19.46■□□□□ 0.71
RPL28-209ENST00000560055 HSD17B4P51659 736 aa19.46■□□□□ 0.71
RPL28-209ENST00000560055 NEK4P51957 841 aa19.46■□□□□ 0.71
RPL28-209ENST00000560055 ANKRD1Q15327 319 aa19.46■□□□□ 0.71
RPL28-209ENST00000560055 SYTL5Q8TDW5 730 aaPredicted RBP19.46■□□□□ 0.71
RPL28-209ENST00000560055 TPCN1Q9ULQ1 816 aa19.46■□□□□ 0.71
RPL28-209ENST00000560055 CALML3P27482 149 aa19.45■□□□□ 0.7
RPL28-209ENST00000560055 GJA8P48165 433 aa19.45■□□□□ 0.7
RPL28-209ENST00000560055 CCT2P78371 535 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 PRPF38BQ5VTL8 546 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
RPL28-209ENST00000560055 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 NCOA5Q9HCD5 579 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 COL20A1Q9P218 1284 aa19.45■□□□□ 0.7
RPL28-209ENST00000560055 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
RPL28-209ENST00000560055 LOC102724159A0A0B4J2E5 919 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 IFNAR1P17181 557 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 PWP2Q15269 919 aaKnown RBP19.44■□□□□ 0.7
RPL28-209ENST00000560055 PRAMEF19Q5SWL8 479 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 SAMD3Q8N6K7 520 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 DNERQ8NFT8 737 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 KATNBL1Q9H079 304 aa19.44■□□□□ 0.7
RPL28-209ENST00000560055 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
RPL28-209ENST00000560055 ASB14A6NK59 587 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 ZNF865P0CJ78 1059 aaPredicted RBP19.43■□□□□ 0.7
RPL28-209ENST00000560055 EDNRBP24530 442 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 ALDH5A1P51649 535 aaPredicted RBP19.43■□□□□ 0.7
RPL28-209ENST00000560055 U2AF1L4Q8WU68 220 aaKnown RBP19.43■□□□□ 0.7
RPL28-209ENST00000560055 SHISA4Q96DD7 197 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 DEFB118Q96PH6 123 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 CRISPLD2Q9H0B8 497 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.43■□□□□ 0.7
RPL28-209ENST00000560055 MCM3APO60318 1980 aa19.43■□□□□ 0.7
RPL28-209ENST00000560055 SEPT4O43236 478 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 PRPF3O43395 683 aaKnown RBP19.42■□□□□ 0.7
RPL28-209ENST00000560055 PFKFB2O60825 505 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 SGPL1O95470 568 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 CFBP00751 764 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 SCRN1Q12765 414 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 LHX8Q68G74 356 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 WWC2Q6AWC2 1192 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 TYW1BQ6NUM6 668 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 ABHD16BQ9H3Z7 469 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 CNPY2Q9Y2B0 182 aa19.42■□□□□ 0.7
RPL28-209ENST00000560055 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
RPL28-209ENST00000560055 PIK3CDO00329 1044 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 STK3Q13188 491 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 PKN1Q16512 942 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 ME3Q16798 604 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 PFKFB3Q16875 520 aaPredicted RBP19.41■□□□□ 0.7
RPL28-209ENST00000560055 HEATR3Q7Z4Q2 680 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 GPKOWQ92917 476 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RPL28-209ENST00000560055 PHKBQ93100 1093 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 TAAR1Q96RJ0 339 aa19.41■□□□□ 0.7
RPL28-209ENST00000560055 RNF26Q9BY78 433 aaPredicted RBP19.41■□□□□ 0.7
RPL28-209ENST00000560055 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
RPL28-209ENST00000560055 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
RPL28-209ENST00000560055 DDX20Q9UHI6 824 aaKnown RBP19.41■□□□□ 0.7
RPL28-209ENST00000560055 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
RPL28-209ENST00000560055 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 STXBP3O00186 592 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 MSCO60682 206 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 LARGE1O95461 756 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 POLR2MP0CAP2 368 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 CAPN2P17655 700 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 HOXA13P31271 388 aaPredicted RBP19.4■□□□□ 0.7
RPL28-209ENST00000560055 ACVR2BQ13705 512 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 RABEP1Q15276 862 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 PPP1R18Q6NYC8 613 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
RPL28-209ENST00000560055 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 OGDHLQ9ULD0 1010 aa19.4■□□□□ 0.7
RPL28-209ENST00000560055 LRRC37A2A6NM11 1700 aa19.39■□□□□ 0.7
RPL28-209ENST00000560055 MEIS2O14770 477 aa19.39■□□□□ 0.69
RPL28-209ENST00000560055 SCG2P13521 617 aa19.39■□□□□ 0.69
RPL28-209ENST00000560055 NSUN6Q8TEA1 469 aaKnown RBP19.39■□□□□ 0.69
RPL28-209ENST00000560055 RMDN3Q96TC7 470 aa19.39■□□□□ 0.69
RPL28-209ENST00000560055 PXMP2Q9NR77 195 aa19.39■□□□□ 0.69
RPL28-209ENST00000560055 DNAH12Q6ZR08 3092 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms