RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 OGDHLQ9ULD0 1010 aa15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 RTN1Q16799 776 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 ARMCX2Q7L311 632 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 CCDC82Q8N4S0 544 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
CHRNB4-204ENST00000559849 CCDC196A0A1B0GTZ2 297 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 ZNF865P0CJ78 1059 aaPredicted RBP15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 ACVR2BQ13705 512 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 SLC30A10Q6XR72 485 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 DNERQ8NFT8 737 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 PIBF1Q8WXW3 757 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 TBC1D5Q92609 795 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 UPF3BQ9BZI7 483 aaKnown RBP15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 MAP3K20Q9NYL2 800 aaKnown RBP15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 ASTN1O14525 1302 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 GOLGA8AA7E2F4 631 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 GOLGA8BA8MQT2 603 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 SAMD3Q8N6K7 520 aa15.82■□□□□ 0.12
CHRNB4-204ENST00000559849 CFBP00751 764 aa15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 METAP2P50579 478 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 EVCP57679 992 aa15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 MPHOSPH6Q99547 160 aaKnown RBP15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 LCTP09848 1927 aa15.81■□□□□ 0.12
CHRNB4-204ENST00000559849 B4DLN1 442 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 OPLAHO14841 1288 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 AKR1A1P14550 325 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 MRPL12P52815 198 aaKnown RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 MORC4Q8TE76 937 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 IL17RAQ96F46 866 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 FAM217BQ9NTX9 383 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 PDRG1Q9NUG6 133 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 ZHX1Q9UKY1 873 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 FARP2O94887 1054 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 GHRHRQ02643 423 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 UBE2Q1Q7Z7E8 422 aa15.8■□□□□ 0.12
CHRNB4-204ENST00000559849 RARBP10826 455 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 CDC27P30260 824 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 HSD17B4P51659 736 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 ANO1Q5XXA6 986 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 KATNBL1Q9H079 304 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 FUT2Q10981 343 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 CCDC144BQ3MJ40 725 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 NECAB2Q7Z6G3 386 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 ARRDC4Q8NCT1 418 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 ZNF274Q96GC6 653 aaPredicted RBP15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 PAWRQ96IZ0 340 aaKnown RBP15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
CHRNB4-204ENST00000559849 hCG_1642624A0A1W2PR95 340 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 GCOM1H8Y6P7 765 aaPredicted RBP15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 TAAR1Q96RJ0 339 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 ALDH8A1Q9H2A2 487 aaPredicted RBP15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 VTA1Q9NP79 307 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 COL20A1Q9P218 1284 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 V9GY48 417 aaPredicted RBP15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 FRMPD3Q5JV73 1810 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 CNTNAP5Q8WYK1 1306 aa15.78■□□□□ 0.12
CHRNB4-204ENST00000559849 EDNRBP24530 442 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 PDE4DQ08499 809 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 IWS1Q96ST2 819 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 XPNPEP3Q9NQH7 507 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 NID2Q14112 1375 aa15.77■□□□□ 0.12
CHRNB4-204ENST00000559849 DUSP11O75319 330 aaKnown RBP15.77■□□□□ 0.11
CHRNB4-204ENST00000559849 ARHGEF16Q5VV41 709 aa15.77■□□□□ 0.11
CHRNB4-204ENST00000559849 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.11
CHRNB4-204ENST00000559849 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
CHRNB4-204ENST00000559849 ANKRD1Q15327 319 aa15.76■□□□□ 0.11
CHRNB4-204ENST00000559849 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
CHRNB4-204ENST00000559849 TAPT1Q6NXT6 567 aa15.76■□□□□ 0.11
CHRNB4-204ENST00000559849 CEP290O15078 2479 aa15.76■□□□□ 0.11
CHRNB4-204ENST00000559849 DNM1LO00429 736 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 TNFAIP2Q03169 654 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 RNF180Q86T96 592 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 FBXO16Q8IX29 292 aaPredicted RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 DIS3LQ8TF46 1054 aaKnown RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 CUL5Q93034 780 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 HTATIP2Q9BUP3 242 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 PSTPIP2Q9H939 334 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 hCG_1984214I3L0E3 225 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms