RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SMAD7O15105 426 aaKnown RBP6.04□□□□□ -1.44
SPG11-218ENST00000559754 BUB1BO60566 1050 aaPredicted RBP6.04□□□□□ -1.44
SPG11-218ENST00000559754 KCNH1O95259 989 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 AFF3P51826 1226 aaKnown RBP6.04□□□□□ -1.44
SPG11-218ENST00000559754 CNKSR3Q6P9H4 555 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 IGDCC3Q8IVU1 814 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 NLGN1Q8N2Q7 840 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 LZTR1Q8N653 840 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
SPG11-218ENST00000559754 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 APEX2Q9UBZ4 518 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 PRKAG3Q9UGI9 489 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 NUDT5Q9UKK9 219 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
SPG11-218ENST00000559754 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 NPHS1O60500 1241 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 GLI4P10075 376 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 ZNF200P98182 395 aaPredicted RBP6.03□□□□□ -1.44
SPG11-218ENST00000559754 ARID5AQ03989 594 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 FXNQ16595 210 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 LARP1BQ659C4 914 aaKnown RBP6.03□□□□□ -1.44
SPG11-218ENST00000559754 FAM129CQ86XR2 697 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 TMEFF1Q8IYR6 380 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 NETO2Q8NC67 525 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 DACT3Q96B18 629 aaPredicted RBP6.03□□□□□ -1.44
SPG11-218ENST00000559754 RNF38Q9H0F5 515 aa6.03□□□□□ -1.44
SPG11-218ENST00000559754 INHBBP09529 407 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 NCKAP1LP55160 1127 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 PRR5P85299 388 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 SCRN1Q12765 414 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 CPNE8Q86YQ8 564 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 PANK1Q8TE04 598 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 COPS5Q92905 334 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 PEX11GQ96HA9 241 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 MMP19Q99542 508 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 ZCCHC4Q9H5U6 513 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 CYP26B1Q9NR63 512 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.02□□□□□ -1.451e-7■□□□□ 10
SPG11-218ENST00000559754 RWDD3Q9Y3V2 267 aa6.02□□□□□ -1.45
SPG11-218ENST00000559754 ZC3H12DA2A288 527 aaKnown RBP6.01□□□□□ -1.45
SPG11-218ENST00000559754 BMP7P18075 431 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 CAP1Q01518 475 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 SLC9A5Q14940 896 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 GTF2IRD2BQ6EKJ0 949 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 IQCEQ6IPM2 695 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 C6orf15Q6UXA7 325 aaPredicted RBP6.01□□□□□ -1.45
SPG11-218ENST00000559754 GTF2IRD2Q86UP8 949 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 TSPAN17Q96FV3 270 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 MRGPRX3Q96LB0 322 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 PWWP2AQ96N64 755 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 EPB41L4AQ9HCS5 686 aaPredicted RBP6.01□□□□□ -1.45
SPG11-218ENST00000559754 CLEC1BQ9P126 229 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 LRP2BPQ9P2M1 347 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 GULP1Q9UBP9 304 aa6.01□□□□□ -1.45
SPG11-218ENST00000559754 R3HCC1Q9Y3T6 440 aaKnown RBP6.01□□□□□ -1.45
SPG11-218ENST00000559754 C7orf72A4D263 438 aa6□□□□□ -1.45
SPG11-218ENST00000559754 DDAH1O94760 285 aa6□□□□□ -1.45
SPG11-218ENST00000559754 SASH1O94885 1247 aa6□□□□□ -1.45
SPG11-218ENST00000559754 ZBTB7AO95365 584 aa6□□□□□ -1.45
SPG11-218ENST00000559754 FGRP09769 529 aa6□□□□□ -1.45
SPG11-218ENST00000559754 NCAM1P13591 858 aa6□□□□□ -1.45
SPG11-218ENST00000559754 PLS3P13797 630 aa6□□□□□ -1.45
SPG11-218ENST00000559754 ETFBP38117 255 aa6□□□□□ -1.45
SPG11-218ENST00000559754 SV2CQ496J9 727 aa6□□□□□ -1.45
SPG11-218ENST00000559754 LILRA6Q6PI73 481 aa6□□□□□ -1.45
SPG11-218ENST00000559754 MARCH10Q8NA82 808 aaPredicted RBP6□□□□□ -1.45
SPG11-218ENST00000559754 SLC43A3Q8NBI5 491 aa6□□□□□ -1.45
SPG11-218ENST00000559754 ALG3Q92685 438 aa6□□□□□ -1.45
SPG11-218ENST00000559754 TINF2Q9BSI4 451 aa6□□□□□ -1.45
SPG11-218ENST00000559754 MTA3Q9BTC8 594 aa6□□□□□ -1.45
SPG11-218ENST00000559754 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
SPG11-218ENST00000559754 PARD6AQ9NPB6 346 aa6□□□□□ -1.45
SPG11-218ENST00000559754 GPRC5CQ9NQ84 441 aa6□□□□□ -1.45
SPG11-218ENST00000559754 FAN1Q9Y2M0 1017 aa6□□□□□ -1.45
SPG11-218ENST00000559754 SUSD5O60279 629 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 THBDP07204 575 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 FBLN1P23142 703 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 IGFBP6P24592 240 aaPredicted RBP5.99□□□□□ -1.45
SPG11-218ENST00000559754 HOXC12P31275 282 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 RBM25P49756 843 aaKnown RBP5.99□□□□□ -1.45
SPG11-218ENST00000559754 E4F1Q66K89 784 aaPredicted RBP5.99□□□□□ -1.45
SPG11-218ENST00000559754 WWC2Q6AWC2 1192 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 EEPD1Q7L9B9 569 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 SP8Q8IXZ3 490 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 KCNC2Q96PR1 638 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 EPN3Q9H201 632 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
SPG11-218ENST00000559754 AGRPO00253 132 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 CPP00450 1065 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 CTSWP56202 376 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 FOXO4P98177 505 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 DCP2Q8IU60 420 aaKnown RBP5.98□□□□□ -1.45
SPG11-218ENST00000559754 LINC01356Q8N9X3 169 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 BTN2A2Q8WVV5 523 aa5.98□□□□□ -1.45
SPG11-218ENST00000559754 CCDC140Q96MF4 163 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms