RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 HPSEQ9Y251 543 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 RIPK3Q9Y572 518 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 FAM237AA0A1B0GTK4 181 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 PIK3CDO00329 1044 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 TDP2O95551 362 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 RESP18Q5W5W9 173 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 ZNF214Q9UL59 606 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 ABCB11O95342 1321 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 NFIBO00712 420 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 CXCL11O14625 94 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 SLC37A4O43826 429 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 CELF2O95319 508 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 PFKFB1P16118 471 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 COG2Q14746 738 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 GAS2L3Q86XJ1 694 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 JMYQ8N9B5 988 aa16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 GBA2Q9HCG7 927 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-209ENST00000559551 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 RRAGDQ9NQL2 400 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 CFBP00751 764 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 GPAT2Q6NUI2 795 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 MRPL11Q9Y3B7 192 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-209ENST00000559551 SYCE3A1L190 88 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 BMP15O95972 392 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 ALAS1P13196 640 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 GHRHRQ02643 423 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 AP3B2Q13367 1082 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 CHADLQ6NUI6 762 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 A0A087X0B3 334 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 ZBED4O75132 1171 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 HSD17B4P51659 736 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 ZNF445P59923 1031 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 CAMK4Q16566 473 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 HOMER2Q9NSB8 354 aa16.25■□□□□ 0.19
RABGGTA-209ENST00000559551 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 VWA3AA6NCI4 1184 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 FKBP1BP68106 108 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
RABGGTA-209ENST00000559551 UNCXA6NJT0 531 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 FDX1P10109 184 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 SREBF1P36956 1147 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 ARHGAP4P98171 946 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 TRAF1Q13077 416 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 ARL6IP4Q66PJ3 421 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 MS4A4AQ96JQ5 239 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 DDX19AQ9NUU7 478 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 BTBD7Q9P203 1132 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 NEMFO60524 1076 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 POLR2MP0CAP2 368 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 PPP4R3AQ6IN85 833 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 RBM43Q6ZSC3 357 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 GJA10Q969M2 543 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 LENG9Q96B70 501 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 R3HDMLQ9H3Y0 253 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 HOXC10Q9NYD6 342 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 ZNFX1Q9P2E3 1918 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-209ENST00000559551 KIAA1217Q5T5P2 1943 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 CNMDO75829 334 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 ZNF202O95125 648 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 FOSP01100 380 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 XRCC6P12956 609 aaKnown RBP eCLIP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 OAZ1P54368 228 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 SNRNP48Q6IEG0 339 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 HAS1Q92839 578 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 TRERF1Q96PN7 1200 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 PURBQ96QR8 312 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 NUP62CLQ9H1M0 184 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 CYP3A7-CYP3A51PA0A087WV96 503 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 SPDYE3A6NKU9 549 aa16.22■□□□□ 0.19
RABGGTA-209ENST00000559551 PP2D1A8MPX8 630 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms