RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 LEMD3Q9Y2U8 911 aa8.48□□□□□ -1.05
ZEB1-216ENST00000559496 PLSCR1O15162 318 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 PCCAP05165 728 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-216ENST00000559496 ASPAP45381 313 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 PPP2R3AQ06190 1150 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 TXNRD1Q16881 649 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
ZEB1-216ENST00000559496 EPHA10Q5JZY3 1008 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 ZNF34Q8IZ26 560 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 ZBTB38Q8NAP3 1195 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-216ENST00000559496 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 TMEM39AQ9NV64 488 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 PRKAG2Q9UGJ0 569 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 AP4E1Q9UPM8 1137 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 EXOC6BQ9Y2D4 811 aa8.47□□□□□ -1.05
ZEB1-216ENST00000559496 TNS1Q9HBL0 1735 aaKnown RBP8.46□□□□□ -1.05
ZEB1-216ENST00000559496 SCN7AQ01118 1682 aa8.46□□□□□ -1.05
ZEB1-216ENST00000559496 UBN2Q6ZU65 1347 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 ADAMTS4O75173 837 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 SURF6O75683 361 aaKnown RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 NFICP08651 508 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 RABL6Q3YEC7 729 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 PARP10Q53GL7 1025 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 NXPE4Q6UWF7 544 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 CLEC4GQ6UXB4 293 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 SMIM5Q71RC9 77 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 ZAR1Q86SH2 424 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 FAM89AQ96GI7 184 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 TBC1D32Q96NH3 1257 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 GTPBP4Q9BZE4 634 aaKnown RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 ACSS3Q9H6R3 686 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 FAM105AQ9NUU6 356 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 TMEM51Q9NW97 253 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 NARFQ9UHQ1 456 aa8.46□□□□□ -1.06
ZEB1-216ENST00000559496 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 ISY1Q9ULR0 285 aaKnown RBP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
ZEB1-216ENST00000559496 CDHR2Q9BYE9 1310 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 RAB11FIP3O75154 756 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 GSTP1P09211 210 aaKnown RBP8.45□□□□□ -1.06
ZEB1-216ENST00000559496 SLFN14P0C7P3 912 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 RAB6AP20340 208 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 FOXO4P98177 505 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 OS9Q13438 667 aaPredicted RBP8.45□□□□□ -1.06
ZEB1-216ENST00000559496 HSP90AB4PQ58FF6 505 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 MCTP1Q6DN14 999 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 LMBR1LQ6UX01 489 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 AMIGO3Q86WK7 504 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 TRAIPQ9BWF2 469 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 SEMA6CQ9H3T2 930 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 CCDC86Q9H6F5 360 aaKnown RBP8.45□□□□□ -1.06
ZEB1-216ENST00000559496 SRP68Q9UHB9 627 aaKnown RBP8.45□□□□□ -1.06
ZEB1-216ENST00000559496 TRMT112Q9UI30 125 aaKnown RBP8.45□□□□□ -1.06
ZEB1-216ENST00000559496 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
ZEB1-216ENST00000559496 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 UBR3Q6ZT12 1888 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 SH3TC1Q8TE82 1336 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 SMARCA5O60264 1052 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 LIG1P18858 919 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 HOXA10P31260 410 aaPredicted RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 RFC4P35249 363 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 ADMP35318 185 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 SUSD4Q5VX71 490 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 SHISA5Q8N114 240 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 UTP14AQ9BVJ6 771 aaKnown RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 ZC3H12CQ9C0D7 883 aaKnown RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 KRT82Q9NSB4 513 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 PA2G4Q9UQ80 394 aaKnown RBP8.44□□□□□ -1.06
ZEB1-216ENST00000559496 AKAP2Q9Y2D5 859 aa8.44□□□□□ -1.06
ZEB1-216ENST00000559496 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 FSD2A1L4K1 749 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 GOLGA6L3A6NEY3 463 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 IRS4O14654 1257 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 LETM1O95202 739 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 FOSL1P15407 271 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 MAPK8P45983 427 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 RFX5P48382 616 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 FMR1Q06787 632 aaKnown RBP eCLIP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 G3BP1Q13283 466 aaKnown RBP eCLIP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 TBC1D9BQ66K14 1250 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 DHX37Q8IY37 1157 aaKnown RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 GATA6Q92908 595 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 KIF1BPQ96EK5 621 aa8.43□□□□□ -1.06
ZEB1-216ENST00000559496 WDR89Q96FK6 387 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 OAS3Q9Y6K5 1087 aaKnown RBP8.43□□□□□ -1.06
ZEB1-216ENST00000559496 MYH3P11055 1940 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms