RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
LRRC28-213ENST00000559399 TMEM265A0A087WTH1 108 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 DLL1O00548 723 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 RPS6P62753 249 aaKnown RBP17.51■□□□□ 0.39
LRRC28-213ENST00000559399 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
LRRC28-213ENST00000559399 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 TMEM63BQ5T3F8 832 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
LRRC28-213ENST00000559399 CDX2Q99626 313 aaPredicted RBP17.51■□□□□ 0.39
LRRC28-213ENST00000559399 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
LRRC28-213ENST00000559399 B4E1Z4 1266 aa17.5■□□□□ 0.39
LRRC28-213ENST00000559399 CD4P01730 458 aa17.5■□□□□ 0.39
LRRC28-213ENST00000559399 CSF2RAP15509 400 aa17.5■□□□□ 0.39
LRRC28-213ENST00000559399 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
LRRC28-213ENST00000559399 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
LRRC28-213ENST00000559399 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
LRRC28-213ENST00000559399 TTYH1Q9H313 450 aaPredicted RBP17.5■□□□□ 0.39
LRRC28-213ENST00000559399 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
LRRC28-213ENST00000559399 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.49■□□□□ 0.39
LRRC28-213ENST00000559399 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.49■□□□□ 0.39
LRRC28-213ENST00000559399 EDNRBP24530 442 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 PDE4DQ08499 809 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 USH1GQ495M9 461 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 PSRC1Q6PGN9 363 aaPredicted RBP17.49■□□□□ 0.39
LRRC28-213ENST00000559399 DNERQ8NFT8 737 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 HIPK3Q9H422 1215 aa17.49■□□□□ 0.39
LRRC28-213ENST00000559399 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 GRIN2DO15399 1336 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 RBM47A0AV96 593 aaKnown RBP17.48■□□□□ 0.39
LRRC28-213ENST00000559399 DNAJB2P25686 324 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 CPT1AP50416 773 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 PSMC6P62333 389 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 PPP2R5BQ15173 497 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
LRRC28-213ENST00000559399 ASPRV1Q53RT3 343 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 C16orf59Q7L2K0 433 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
LRRC28-213ENST00000559399 RGS22Q8NE09 1264 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 KRT23Q9C075 422 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
LRRC28-213ENST00000559399 TNKSO95271 1327 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 B4DLN1 442 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 CYP2C18P33260 490 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
LRRC28-213ENST00000559399 TMEM240Q5SV17 173 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.47■□□□□ 0.39
LRRC28-213ENST00000559399 OR6J1Q8NGC5 347 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 SCFD2Q8WU76 684 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 MYLIPQ8WY64 445 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 TRPV6Q9H1D0 765 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 ABCB11O95342 1321 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 RAD50Q92878 1312 aa17.47■□□□□ 0.39
LRRC28-213ENST00000559399 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
LRRC28-213ENST00000559399 B4GALT4O60513 344 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 ACRP10323 421 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 PURAQ00577 322 aaKnown RBP17.46■□□□□ 0.39
LRRC28-213ENST00000559399 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
LRRC28-213ENST00000559399 RASIP1Q5U651 963 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 ADGRF4Q8IZF3 695 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 MAFAQ8NHW3 353 aaPredicted RBP17.46■□□□□ 0.39
LRRC28-213ENST00000559399 MAF1Q9H063 256 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 IL23AQ9NPF7 189 aa17.46■□□□□ 0.39
LRRC28-213ENST00000559399 UMODL1Q5DID0 1318 aa17.46■□□□□ 0.38
LRRC28-213ENST00000559399 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 MYL3P08590 195 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 GSPT1P15170 499 aaKnown RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 FOSL2P15408 326 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 ZNF365Q70YC5 407 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 TIFAQ96CG3 184 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 MTG1Q9BT17 334 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 NOC4LQ9BVI4 516 aaKnown RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 IL25Q9H293 177 aa17.45■□□□□ 0.38
LRRC28-213ENST00000559399 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 MTIF3Q9H2K0 278 aaKnown RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 GPHNQ9NQX3 736 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-213ENST00000559399 PDE4AP27815 886 aa17.44■□□□□ 0.38
LRRC28-213ENST00000559399 IFIT1BQ5T764 474 aaKnown RBP17.44■□□□□ 0.38
LRRC28-213ENST00000559399 MCF2L2Q86YR7 1114 aa17.44■□□□□ 0.38
LRRC28-213ENST00000559399 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
LRRC28-213ENST00000559399 A0A0C4DFX4 3053 aa17.44■□□□□ 0.38
LRRC28-213ENST00000559399 KPNA6O60684 536 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 TXNP10599 105 aaKnown RBP17.43■□□□□ 0.38
LRRC28-213ENST00000559399 CCL23P55773 120 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 TTLL4Q14679 1199 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 FBXO11Q86XK2 927 aa17.43■□□□□ 0.38
LRRC28-213ENST00000559399 SYTL5Q8TDW5 730 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms