RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LY9Q9HBG7 655 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 VTA1Q9NP79 307 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 DOCK3Q8IZD9 2030 aa5.07□□□□□ -1.6
SNX1-205ENST00000559339 MYH4Q9Y623 1939 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 SOWAHBA6NEL2 793 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 MOXD2PA6NHM9 499 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 SH2B2O14492 632 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 ZBTB43O43298 467 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 PGK1P00558 417 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 CFBP00751 764 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 C6orf222P0C671 652 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 COL6A1P12109 1028 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 TAL1P17542 331 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 HSPA4P34932 840 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 ALDH5A1P51649 535 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 RCAN1P53805 252 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 ATN1P54259 1190 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 ANTXR2P58335 489 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 LRRC41Q15345 812 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 STXBP2Q15833 593 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 GNASQ5JWF2 1037 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 ARHGEF16Q5VV41 709 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 IQSEC1Q6DN90 963 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 BLOC1S2Q6QNY1 142 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 SLC30A10Q6XR72 485 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 SGMS1Q86VZ5 419 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 MICU3Q86XE3 530 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 FANCBQ8NB91 859 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 CLEC4DQ8WXI8 215 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 CUL5Q93034 780 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 VTI1AQ96AJ9 217 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 GLT1D1Q96MS3 346 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 JAKMIP1Q96N16 626 aaKnown RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 PIGSQ96S52 555 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 IWS1Q96ST2 819 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 RMDN3Q96TC7 470 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 TSEN34Q9BSV6 310 aaKnown RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 SPZ1Q9BXG8 430 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 CPVLQ9H3G5 476 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 GPHNQ9NQX3 736 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 RBM28Q9NW13 759 aaKnown RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 NAP1L2Q9ULW6 460 aaPredicted RBP5.06□□□□□ -1.6
SNX1-205ENST00000559339 Q9Y3F1 56 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 TAF6LQ9Y6J9 622 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 A0A0G2JMZ2 1700 aa5.06□□□□□ -1.6
SNX1-205ENST00000559339 RLFQ13129 1914 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 ELP1O95163 1332 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 MROH7Q68CQ1 1323 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 ZNF236Q9UL36 1845 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 H0YGN5 161 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 GCOM1H8Y6P7 765 aaPredicted RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
SNX1-205ENST00000559339 CABYRO75952 493 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 POLR2MP0CAP2 368 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 CASTP20810 708 aaKnown RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 CST5P28325 142 aaPredicted RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 ADCYAP1R1P41586 468 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 CPT1AP50416 773 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 ACLYP53396 1101 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 GJA9P57773 515 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 EXOSC10Q01780 885 aaKnown RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 TTLL4Q14679 1199 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 KCNA10Q16322 511 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 RTN1Q16799 776 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 ADCK5Q3MIX3 580 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 C1orf53Q5VUE5 145 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 KCNV1Q6PIU1 500 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 CHRDL2Q6WN34 429 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 SLC39A5Q6ZMH5 540 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 TLK2Q86UE8 772 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 FBXO16Q8IX29 292 aaPredicted RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 C7orf61Q8IZ16 206 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 RASEFQ8IZ41 740 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 CCDC82Q8N4S0 544 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 SMARCC2Q8TAQ2 1214 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 SYTL5Q8TDW5 730 aaPredicted RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 MORC4Q8TE76 937 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 SCFD2Q8WU76 684 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 PIBF1Q8WXW3 757 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 FERMT2Q96AC1 680 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 MTMR8Q96EF0 704 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 FGD4Q96M96 766 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 PURBQ96QR8 312 aaKnown RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 LBHD1Q9BQE6 289 aaPredicted RBP5.05□□□□□ -1.6
SNX1-205ENST00000559339 MYL10Q9BUA6 226 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 LRRC2Q9BYS8 371 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 WDR11Q9BZH6 1224 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 SENP2Q9HC62 589 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 STARD7Q9NQZ5 370 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 PHF24Q9UPV7 400 aa5.05□□□□□ -1.6
SNX1-205ENST00000559339 RBBP6Q7Z6E9 1792 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 SYNRGQ9UMZ2 1314 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 KLF18A0A0U1RQI7 1052 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 A0A1W2PQ45 241 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 A0A1W2PQY0 241 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 GOLGA8AA7E2F4 631 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 GOLGA8BA8MQT2 603 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 DCDC2CA8MYV0 355 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 hCG_1984214I3L0E3 225 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 DYNC1LI2O43237 492 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms