RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TECP42680 631 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 GSTO1P78417 241 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 NEK8Q86SG6 692 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 ERGIC2Q96RQ1 377 aa18.52■□□□□ 0.56
SPG11-215ENST00000559193 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
SPG11-215ENST00000559193 ANKIB1Q9P2G1 1089 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 DUSP10Q9Y6W6 482 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 CYP27A1Q02318 531 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 FIGNQ5HY92 759 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 PCMTD1Q96MG8 357 aaPredicted RBP18.51■□□□□ 0.55
SPG11-215ENST00000559193 SEMA6BQ9H3T3 888 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 PODXL2Q9NZ53 605 aa18.51■□□□□ 0.55
SPG11-215ENST00000559193 DDX60LQ5H9U9 1706 aaKnown RBP18.51■□□□□ 0.55
SPG11-215ENST00000559193 A0A1W2PQJ5 194 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 ZNF263O14978 683 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 ZPR1O75312 459 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
SPG11-215ENST00000559193 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 COBLL1Q53SF7 1204 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 FAM71BQ8TC56 605 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
SPG11-215ENST00000559193 EYA3Q99504 573 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 GNPATO15228 680 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 PPP1R2P41236 205 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 CDK8P49336 464 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 CDK17Q00537 523 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
SPG11-215ENST00000559193 GOLGA5Q8TBA6 731 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 TBCKQ8TEA7 893 aa18.5■□□□□ 0.55
SPG11-215ENST00000559193 ANO9A1A5B4 782 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
SPG11-215ENST00000559193 IPO7O95373 1038 aaKnown RBP18.49■□□□□ 0.55
SPG11-215ENST00000559193 GNA11P29992 359 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 CKAP4Q07065 602 aaKnown RBP18.49■□□□□ 0.55
SPG11-215ENST00000559193 NFIXQ14938 502 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 CNNM4Q6P4Q7 775 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 RRP36Q96EU6 259 aaKnown RBP18.49■□□□□ 0.55
SPG11-215ENST00000559193 MACROD2A1Z1Q3 448 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 ZNF185O15231 689 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 PLEKP08567 350 aaPredicted RBP18.49■□□□□ 0.55
SPG11-215ENST00000559193 ACTN2P35609 894 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 VAV2P52735 878 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 AMPD3Q01432 767 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 NEDD1Q8NHV4 660 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 SLC39A2Q9NP94 309 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
SPG11-215ENST00000559193 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
SPG11-215ENST00000559193 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
SPG11-215ENST00000559193 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
SPG11-215ENST00000559193 GRB10Q13322 594 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 HSP90B2PQ58FF3 399 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 CENPPQ6IPU0 288 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 PIGSQ96S52 555 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 VIPAS39Q9H9C1 493 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 BLOC1S4Q9NUP1 217 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 TMEM260Q9NX78 707 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 EPHB6O15197 1021 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 PHACTR2O75167 634 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 IDEP14735 1019 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 CAPN2P17655 700 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 BTDP43251 543 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 CALML4Q96GE6 196 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 ACBD3Q9H3P7 528 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 MED4Q9NPJ6 270 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
SPG11-215ENST00000559193 LRWD1Q9UFC0 647 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 SIK3Q9Y2K2 1263 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 CDK5RAP2Q96SN8 1893 aa18.48■□□□□ 0.55
SPG11-215ENST00000559193 LDHCP07864 332 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 GRAPQ13588 217 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 SOGA3Q5TF21 947 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 REXO1Q8N1G1 1221 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 ZNF287Q9HBT7 754 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 VAT1LQ9HCJ6 419 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 SEC63Q9UGP8 760 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 MYMKA6NI61 221 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 MCM3P25205 808 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 HNRNPH3P31942 346 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 TXKP42681 527 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 AARSP49588 968 aaKnown RBP eCLIP18.47■□□□□ 0.55
SPG11-215ENST00000559193 KIF5AQ12840 1032 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 ZNF804AQ7Z570 1209 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 CEP95Q96GE4 821 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms