RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ADCY6O43306 1168 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 PFKFB2O60825 505 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 HSD17B4P51659 736 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 FGD1P98174 961 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 STK3Q13188 491 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 PRAMEF19Q5SWL8 479 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 MAMDC4Q6UXC1 1216 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 NOL8Q76FK4 1167 aaKnown RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 ANKRD35Q8N283 1001 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 SYTL5Q8TDW5 730 aaPredicted RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 PHKBQ93100 1093 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 NAP1L2Q9ULW6 460 aaPredicted RBP13.25□□□□□ -0.29
SNX1-204ENST00000559061 PCDHA1Q9Y5I3 950 aa13.25□□□□□ -0.29
SNX1-204ENST00000559061 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
SNX1-204ENST00000559061 STXBP3O00186 592 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
SNX1-204ENST00000559061 CCL5P13501 91 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 IFNAR1P17181 557 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 PTGS1P23219 599 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 NECAB1Q8N987 351 aa13.24□□□□□ -0.29
SNX1-204ENST00000559061 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
SNX1-204ENST00000559061 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
SNX1-204ENST00000559061 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 MEIS2O14770 477 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 EDNRBP24530 442 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 CALML3P27482 149 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 HOXA13P31271 388 aaPredicted RBP13.23□□□□□ -0.29
SNX1-204ENST00000559061 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
SNX1-204ENST00000559061 ALDH5A1P51649 535 aaPredicted RBP13.23□□□□□ -0.29
SNX1-204ENST00000559061 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 IL31RAQ8NI17 732 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 AIFM3Q96NN9 605 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 TAAR1Q96RJ0 339 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
SNX1-204ENST00000559061 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
SNX1-204ENST00000559061 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
SNX1-204ENST00000559061 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
SNX1-204ENST00000559061 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 SOX10P56693 466 aa13.22□□□□□ -0.29
SNX1-204ENST00000559061 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 PPP2R5BQ15173 497 aa13.22□□□□□ -0.29
SNX1-204ENST00000559061 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 LHX8Q68G74 356 aa13.22□□□□□ -0.29
SNX1-204ENST00000559061 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX1-204ENST00000559061 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
SNX1-204ENST00000559061 RPTORQ8N122 1335 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 CCDC85CA6NKD9 419 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 CFBP00751 764 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.29
SNX1-204ENST00000559061 RABEP1Q15276 862 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 NPY5RQ15761 445 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 HEATR3Q7Z4Q2 680 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
SNX1-204ENST00000559061 RNF26Q9BY78 433 aaPredicted RBP13.21□□□□□ -0.29
SNX1-204ENST00000559061 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 BARHL2Q9NY43 387 aa13.21□□□□□ -0.29
SNX1-204ENST00000559061 ALPK3Q96L96 1907 aa13.21□□□□□ -0.3
SNX1-204ENST00000559061 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 JAK2O60674 1132 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 SCG2P13521 617 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 UBXN2AP68543 259 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 UBE2SQ16763 222 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 MFSD14CQ5VZR4 134 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 SLC26A6Q9BXS9 759 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 MAF1Q9H063 256 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 RNF208Q9H0X6 261 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
SNX1-204ENST00000559061 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
SNX1-204ENST00000559061 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
SNX1-204ENST00000559061 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms