RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SUPT20HL2P0C7V6 817 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 HERC4Q5GLZ8 1057 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-206ENST00000558739 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 KANSL2Q9H9L4 492 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
SMAD3-206ENST00000558739 MAP1BP46821 2468 aaKnown RBP14.32□□□□□ -0.12
SMAD3-206ENST00000558739 TCRBV5S4A2TA0A5A2 114 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 GNAI2P04899 355 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 CHGBP05060 677 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 VCPP55072 806 aaKnown RBP14.31□□□□□ -0.12
SMAD3-206ENST00000558739 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 SLC9C2Q5TAH2 1124 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 FBXO22Q8NEZ5 403 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 SEZ6LQ9BYH1 1024 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 NLRC5Q86WI3 1866 aa14.31□□□□□ -0.12
SMAD3-206ENST00000558739 E9PSI1 815 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 LTBRP36941 435 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 DLX2Q07687 328 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-206ENST00000558739 POLA2Q14181 598 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 COL19A1Q14993 1142 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 PUS10Q3MIT2 529 aaKnown RBP14.3□□□□□ -0.12
SMAD3-206ENST00000558739 C12orf60Q5U649 245 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
SMAD3-206ENST00000558739 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
SMAD3-206ENST00000558739 MRPL38Q96DV4 380 aaKnown RBP14.3□□□□□ -0.12
SMAD3-206ENST00000558739 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 RAD9AQ99638 391 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 FBXO40Q9UH90 709 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 ATRXP46100 2492 aa14.3□□□□□ -0.12
SMAD3-206ENST00000558739 TMEM221A6NGB7 291 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 F5H6K3 240 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 M0R296 226 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 NBNO60934 754 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 ZBED4O75132 1171 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 BCAR3O75815 825 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 KLRC3Q07444 240 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
SMAD3-206ENST00000558739 PBXIP1Q96AQ6 731 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 ACAD9Q9H845 621 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 RNF146Q9NTX7 359 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 CLDND1Q9NY35 253 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
SMAD3-206ENST00000558739 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 ASB14A6NK59 587 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 USP17L21D6R901 530 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 SURF6O75683 361 aaKnown RBP14.28□□□□□ -0.12
SMAD3-206ENST00000558739 MBD4O95243 580 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 CHMP4BP1P59074 171 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 ASCL5Q7RTU5 278 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 STK11IPQ8N1F8 1099 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 EDAQ92838 391 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 C1orf115Q9H7X2 142 aa14.28□□□□□ -0.12
SMAD3-206ENST00000558739 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-206ENST00000558739 ANKRD11Q6UB99 2663 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-206ENST00000558739 SNAP25P60880 206 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 SMAD2Q15796 467 aaKnown RBP14.27□□□□□ -0.13
SMAD3-206ENST00000558739 DUSP28Q4G0W2 176 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 EPC2Q52LR7 807 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 MUM1L1Q5H9M0 696 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 IQSEC1Q6DN90 963 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 MTG1Q9BT17 334 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-206ENST00000558739 POLR3EQ9NVU0 708 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 Q9Y3F1 56 aa14.27□□□□□ -0.13
SMAD3-206ENST00000558739 TBX10O75333 385 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 KRT37O76014 449 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 RASA1P20936 1047 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 BFSP2Q13515 415 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMAD3-206ENST00000558739 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 BMP8AQ7Z5Y6 402 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
SMAD3-206ENST00000558739 SSH3Q8TE77 659 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 ATOH1Q92858 354 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-206ENST00000558739 COPS5Q92905 334 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
SMAD3-206ENST00000558739 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
SMAD3-206ENST00000558739 H0Y858 1186 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 GOLIM4O00461 696 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 MBTPS2O43462 519 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 CSPG5O95196 566 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 CXCL10P02778 98 aa14.25□□□□□ -0.13
SMAD3-206ENST00000558739 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms