RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SWAP70Q9UH65 585 aa15.66■□□□□ 0.1
TMED3-205ENST00000558562 ZHX1Q9UKY1 873 aaPredicted RBP15.66■□□□□ 0.1
TMED3-205ENST00000558562 ZDHHC9Q9Y397 364 aa15.66■□□□□ 0.1
TMED3-205ENST00000558562 XIRP2A4UGR9 3374 aa15.66■□□□□ 0.1
TMED3-205ENST00000558562 KLF18A0A0U1RQI7 1052 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 DDX11L8A8MPP1 907 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 USP17L12C9JPN9 530 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 USP17L21D6R901 530 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 KDM4AO75164 1064 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 SNAI1O95863 264 aaPredicted RBP15.65■□□□□ 0.1
TMED3-205ENST00000558562 EEF2P13639 858 aaKnown RBP15.65■□□□□ 0.1
TMED3-205ENST00000558562 EVCP57679 992 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 MRPS5P82675 430 aaKnown RBP15.65■□□□□ 0.1
TMED3-205ENST00000558562 SCRN1Q12765 414 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 SBK1Q52WX2 424 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 RASIP1Q5U651 963 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 NECAB3Q96P71 396 aaPredicted RBP15.65■□□□□ 0.1
TMED3-205ENST00000558562 INCENPQ9NQS7 918 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 ZNF214Q9UL59 606 aaPredicted RBP15.65■□□□□ 0.1
TMED3-205ENST00000558562 FAM184BQ9ULE4 1060 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 CHD7Q9P2D1 2997 aa15.65■□□□□ 0.1
TMED3-205ENST00000558562 REV3LO60673 3130 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 GOLGA8BA8MQT2 603 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 C6orf222P0C671 652 aaPredicted RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 PDIA3P30101 505 aaKnown RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 PLA2G5P39877 138 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 CDK7P50613 346 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 FAM83BQ5T0W9 1011 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 CLEC17AQ6ZS10 378 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 STK11IPQ8N1F8 1099 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 LLPHQ9BRT6 129 aaKnown RBP15.64■□□□□ 0.09
TMED3-205ENST00000558562 PPP1R9AQ9ULJ8 1098 aa15.64■□□□□ 0.09
TMED3-205ENST00000558562 IFIT3O14879 490 aaKnown RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 ADCY6O43306 1168 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 STX6O43752 255 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 ASGR1P07306 291 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 CYP2C18P33260 490 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 CDK8P49336 464 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 CCT2P78371 535 aaKnown RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 SART3Q15020 963 aaKnown RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 CCDC174Q6PII3 467 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 AMOTL1Q8IY63 956 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 TMEM199Q8N511 208 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 ESR2Q92731 530 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 FAM122AQ96E09 287 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 NUP88Q99567 741 aaPredicted RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 NKX2-4Q9H2Z4 354 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 CXXC1Q9P0U4 656 aaPredicted RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 MSRAQ9UJ68 235 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 TCF20Q9UGU0 1960 aaKnown RBP15.63■□□□□ 0.09
TMED3-205ENST00000558562 ELP1O95163 1332 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 MROH7Q68CQ1 1323 aa15.63■□□□□ 0.09
TMED3-205ENST00000558562 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 DUSP11O75319 330 aaKnown RBP15.62■□□□□ 0.09
TMED3-205ENST00000558562 PDCP20941 246 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 PTMSP20962 102 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 SYT1P21579 422 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 SNRNP48Q6IEG0 339 aaKnown RBP15.62■□□□□ 0.09
TMED3-205ENST00000558562 PSRC1Q6PGN9 363 aaPredicted RBP15.62■□□□□ 0.09
TMED3-205ENST00000558562 DDX11Q96FC9 970 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 LY9Q9HBG7 655 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 ZSWIM5Q9P217 1185 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 YBX2Q9Y2T7 364 aaKnown RBP15.62■□□□□ 0.09
TMED3-205ENST00000558562 SYNGAP1Q96PV0 1343 aa15.62■□□□□ 0.09
TMED3-205ENST00000558562 GBF1Q92538 1859 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 ERICH2A1L162 156 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 ARVCFO00192 962 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 JAK2O60674 1132 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 DTNBO60941 627 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 FGRP09769 529 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 ZSCAN22P10073 491 aaPredicted RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 HMGN5P82970 282 aaKnown RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 ACVR2BQ13705 512 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 GNASQ5JWF2 1037 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 FAM126BQ8IXS8 530 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 MICALL1Q8N3F8 863 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 MSL3Q8N5Y2 521 aaKnown RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 NSUN7Q8NE18 718 aaKnown RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 SMARCC2Q8TAQ2 1214 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 IGDCC4Q8TDY8 1250 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 CCDC17Q96LX7 622 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
TMED3-205ENST00000558562 GOPCQ9HD26 462 aa15.61■□□□□ 0.09
TMED3-205ENST00000558562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
TMED3-205ENST00000558562 MCM3APO60318 1980 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms