RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 CCDC196A0A1B0GTZ2 297 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 ASB14A6NK59 587 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 SNAI1O95863 264 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 CFBP00751 764 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 SHISA4Q96DD7 197 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 MAF1Q9H063 256 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 FAM217BQ9NTX9 383 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 ADD3Q9UEY8 706 aaKnown RBP14.29□□□□□ -0.12
SMAD3-205ENST00000558428 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 ASTN1O14525 1302 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 NID2Q14112 1375 aa14.29□□□□□ -0.12
SMAD3-205ENST00000558428 OPLAHO14841 1288 aa14.28□□□□□ -0.12
SMAD3-205ENST00000558428 SEPT4O43236 478 aa14.28□□□□□ -0.12
SMAD3-205ENST00000558428 MSCO60682 206 aa14.28□□□□□ -0.12
SMAD3-205ENST00000558428 PDIA3P30101 505 aaKnown RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 EVCP57679 992 aa14.28□□□□□ -0.12
SMAD3-205ENST00000558428 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
SMAD3-205ENST00000558428 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-205ENST00000558428 RGS19P49795 217 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 CCT2P78371 535 aaKnown RBP14.27□□□□□ -0.13
SMAD3-205ENST00000558428 FUT2Q10981 343 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 ACVR2BQ13705 512 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 DNERQ8NFT8 737 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 ZNF274Q96GC6 653 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-205ENST00000558428 C22orf23Q9BZE7 217 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-205ENST00000558428 ABHD16BQ9H3Z7 469 aa14.27□□□□□ -0.13
SMAD3-205ENST00000558428 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
SMAD3-205ENST00000558428 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 AKR1A1P14550 325 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 CAPN2P17655 700 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 HSD17B4P51659 736 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 NEK4P51957 841 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 AK2P54819 239 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 GHRHRQ02643 423 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 STK3Q13188 491 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 LHX8Q68G74 356 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 SAMD3Q8N6K7 520 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 COL20A1Q9P218 1284 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 OGDHLQ9ULD0 1010 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 V9GY48 417 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-205ENST00000558428 LRRC37A2A6NM11 1700 aa14.26□□□□□ -0.13
SMAD3-205ENST00000558428 B4DLN1 442 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 HOXA13P31271 388 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-205ENST00000558428 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
SMAD3-205ENST00000558428 PDE4DQ08499 809 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 NOL8Q76FK4 1167 aaKnown RBP14.25□□□□□ -0.13
SMAD3-205ENST00000558428 EEPD1Q7L9B9 569 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 MORC4Q8TE76 937 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
SMAD3-205ENST00000558428 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
SMAD3-205ENST00000558428 CPLX1O14810 134 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 FARP2O94887 1054 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-205ENST00000558428 RARBP10826 455 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
SMAD3-205ENST00000558428 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
SMAD3-205ENST00000558428 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 ARHGEF16Q5VV41 709 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 WWC2Q6AWC2 1192 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 FBXO16Q8IX29 292 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-205ENST00000558428 ANKLE1Q8NAG6 615 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 CUL5Q93034 780 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 PHKBQ93100 1093 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-205ENST00000558428 VTA1Q9NP79 307 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 TPCN1Q9ULQ1 816 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 PDE4DIPQ5VU43 2346 aa14.24□□□□□ -0.13
SMAD3-205ENST00000558428 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 IFNAR1P17181 557 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 EIF2AK2P19525 551 aaKnown RBP14.23□□□□□ -0.13
SMAD3-205ENST00000558428 EDNRBP24530 442 aa14.23□□□□□ -0.13
SMAD3-205ENST00000558428 NAPAP54920 295 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms