RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 TICAM2Q86XR7 235 aa25.98■■□□□ 1.75
SPG21-205ENST00000558339 TBC1D10CQ8IV04 446 aa25.98■■□□□ 1.75
SPG21-205ENST00000558339 USP38Q8NB14 1042 aa25.98■■□□□ 1.75
SPG21-205ENST00000558339 LNPKQ9C0E8 428 aa25.98■■□□□ 1.75
SPG21-205ENST00000558339 HIPK3Q9H422 1215 aa25.98■■□□□ 1.75
SPG21-205ENST00000558339 CXXC1Q9P0U4 656 aaPredicted RBP25.98■■□□□ 1.75
SPG21-205ENST00000558339 CCDC171Q6TFL3 1326 aa25.97■■□□□ 1.75
SPG21-205ENST00000558339 ZEB2O60315 1214 aa25.97■■□□□ 1.75
SPG21-205ENST00000558339 DUSP28Q4G0W2 176 aa25.97■■□□□ 1.75
SPG21-205ENST00000558339 HERVK_113Q902F9 699 aa25.97■■□□□ 1.75
SPG21-205ENST00000558339 NOC4LQ9BVI4 516 aaKnown RBP25.97■■□□□ 1.75
SPG21-205ENST00000558339 SNHG28P0DPA3 235 aa25.96■■□□□ 1.75
SPG21-205ENST00000558339 ZNF543Q08ER8 600 aa25.96■■□□□ 1.75
SPG21-205ENST00000558339 VWCEQ96DN2 955 aa25.96■■□□□ 1.75
SPG21-205ENST00000558339 WNT8AQ9H1J5 351 aa25.96■■□□□ 1.75
SPG21-205ENST00000558339 ADD3Q9UEY8 706 aaKnown RBP25.96■■□□□ 1.75
SPG21-205ENST00000558339 RBM47A0AV96 593 aaKnown RBP25.95■■□□□ 1.74
SPG21-205ENST00000558339 PTPDC1A2A3K4 754 aa25.95■■□□□ 1.74
SPG21-205ENST00000558339 CCL23P55773 120 aa25.95■■□□□ 1.74
SPG21-205ENST00000558339 AKNAD1Q5T1N1 836 aa25.95■■□□□ 1.74
SPG21-205ENST00000558339 SEZ6LQ9BYH1 1024 aa25.95■■□□□ 1.74
SPG21-205ENST00000558339 WDR11Q9BZH6 1224 aa25.95■■□□□ 1.74
SPG21-205ENST00000558339 LOC102724159A0A0B4J2E5 919 aa25.94■■□□□ 1.74
SPG21-205ENST00000558339 CALML3P27482 149 aa25.94■■□□□ 1.74
SPG21-205ENST00000558339 PWP2Q15269 919 aaKnown RBP25.94■■□□□ 1.74
SPG21-205ENST00000558339 TTC14Q96N46 770 aa25.94■■□□□ 1.74
SPG21-205ENST00000558339 NEDD4P46934 1319 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 TRIM6-TRIM34B2RNG4 842 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 FGBP02675 491 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 MFSD6Q6ZSS7 791 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 SMC5Q8IY18 1101 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 RILPL2Q969X0 211 aa25.93■■□□□ 1.74
SPG21-205ENST00000558339 ALDH8A1Q9H2A2 487 aaPredicted RBP25.93■■□□□ 1.74
SPG21-205ENST00000558339 WDR19Q8NEZ3 1342 aa25.92■■□□□ 1.74
SPG21-205ENST00000558339 PCP11498 1178 aaKnown RBP25.92■■□□□ 1.74
SPG21-205ENST00000558339 EDNRBP24530 442 aa25.92■■□□□ 1.74
SPG21-205ENST00000558339 RPS6P62753 249 aaKnown RBP25.92■■□□□ 1.74
SPG21-205ENST00000558339 PURAQ00577 322 aaKnown RBP25.92■■□□□ 1.74
SPG21-205ENST00000558339 RNF207Q6ZRF8 634 aa25.92■■□□□ 1.74
SPG21-205ENST00000558339 CHD7Q9P2D1 2997 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 SDSP20132 328 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 OTOP2Q7RTS6 562 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 ZKSCAN3Q9BRR0 538 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 CPVLQ9H3G5 476 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 PRDM12Q9H4Q4 367 aa25.91■■□□□ 1.74
SPG21-205ENST00000558339 TRMT13Q9NUP7 481 aaKnown RBP25.91■■□□□ 1.74
SPG21-205ENST00000558339 GOLGA8HP0CJ92 632 aa25.9■■□□□ 1.74
SPG21-205ENST00000558339 B4GALNT3Q6L9W6 998 aa25.9■■□□□ 1.74
SPG21-205ENST00000558339 OR6J1Q8NGC5 347 aa25.9■■□□□ 1.74
SPG21-205ENST00000558339 SCLYQ96I15 445 aa25.9■■□□□ 1.74
SPG21-205ENST00000558339 POLR3EQ9NVU0 708 aa25.9■■□□□ 1.74
SPG21-205ENST00000558339 YBX2Q9Y2T7 364 aaKnown RBP25.9■■□□□ 1.74
SPG21-205ENST00000558339 MYL3P08590 195 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 CYP2C9P11712 490 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 PLEKHM2Q8IWE5 1019 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 COPS5Q92905 334 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 UBA5Q9GZZ9 404 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 NKX2-4Q9H2Z4 354 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 RNF41Q9H4P4 317 aaPredicted RBP25.89■■□□□ 1.74
SPG21-205ENST00000558339 PRDM6Q9NQX0 595 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 PNMA2Q9UL42 364 aa25.89■■□□□ 1.74
SPG21-205ENST00000558339 TTC28Q96AY4 2481 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 CPT1AP50416 773 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 PDE4DQ08499 809 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 ADGRE1Q14246 886 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 RAB30Q15771 203 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 PPP1R13LQ8WUF5 828 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 ESR2Q92731 530 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 MSRAQ9UJ68 235 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 TNKSO95271 1327 aa25.88■■□□□ 1.73
SPG21-205ENST00000558339 USH1GQ495M9 461 aa25.87■■□□□ 1.73
SPG21-205ENST00000558339 GPATCH4Q5T3I0 446 aaKnown RBP25.87■■□□□ 1.73
SPG21-205ENST00000558339 DGKHQ86XP1 1220 aa25.87■■□□□ 1.73
SPG21-205ENST00000558339 DNERQ8NFT8 737 aa25.87■■□□□ 1.73
SPG21-205ENST00000558339 GAS2L1Q99501 681 aaPredicted RBP25.87■■□□□ 1.73
SPG21-205ENST00000558339 MTG1Q9BT17 334 aaPredicted RBP25.87■■□□□ 1.73
SPG21-205ENST00000558339 MTIF3Q9H2K0 278 aaKnown RBP25.87■■□□□ 1.73
SPG21-205ENST00000558339 OSBPL3Q9H4L5 887 aa25.87■■□□□ 1.73
SPG21-205ENST00000558339 ARIH2O95376 493 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 IGHDP01880 384 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 MFAP1P55081 439 aaKnown RBP25.86■■□□□ 1.73
SPG21-205ENST00000558339 PPP2R5BQ15173 497 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 CHD1LQ86WJ1 897 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 TBC1D5Q92609 795 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 MUC3AQ02505 3323 aa25.86■■□□□ 1.73
SPG21-205ENST00000558339 A6NJR5 290 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 ZNF213O14771 459 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 NKRFO15226 690 aaKnown RBP eCLIP25.85■■□□□ 1.73
SPG21-205ENST00000558339 RABGGTBP53611 331 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 NBPF20Q3BBV1 942 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 RPUSD2Q8IZ73 545 aaKnown RBP25.85■■□□□ 1.73
SPG21-205ENST00000558339 PNMA1Q8ND90 353 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 RGS22Q8NE09 1264 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 SCFD2Q8WU76 684 aa25.85■■□□□ 1.73
SPG21-205ENST00000558339 SCN10AQ9Y5Y9 1956 aa25.84■■□□□ 1.73
SPG21-205ENST00000558339 KDM4AO75164 1064 aa25.84■■□□□ 1.73
SPG21-205ENST00000558339 SUPT20HL2P0C7V6 817 aa25.84■■□□□ 1.73
SPG21-205ENST00000558339 NUCB1Q02818 461 aa25.84■■□□□ 1.73
SPG21-205ENST00000558339 CWC27Q6UX04 472 aaKnown RBP25.84■■□□□ 1.73
SPG21-205ENST00000558339 PPM1EQ8WY54 764 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms