RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PPIGQ13427 754 aaKnown RBP eCLIP18.21■□□□□ 0.513e-7■■■□□ 17.9
TPM1-211ENST00000558314 ITGA7Q13683 1181 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 IMMTQ16891 758 aaKnown RBP18.21■□□□□ 0.51
TPM1-211ENST00000558314 MFSD5Q6N075 450 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 FAM126BQ8IXS8 530 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 TMEM199Q8N511 208 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 CLEC4DQ8WXI8 215 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 MYLIPQ8WY64 445 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.21■□□□□ 0.518e-7■■■□□ 15.2
TPM1-211ENST00000558314 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
TPM1-211ENST00000558314 CABYRO75952 493 aa18.2■□□□□ 0.5
TPM1-211ENST00000558314 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
TPM1-211ENST00000558314 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
TPM1-211ENST00000558314 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
TPM1-211ENST00000558314 CCL23P55773 120 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 RPS6P62753 249 aaKnown RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 CCDC178Q5BJE1 867 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 DGKHQ86XP1 1220 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 ZSCAN10Q96SZ4 725 aaPredicted RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 TTYH1Q9H313 450 aaPredicted RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 HIPK3Q9H422 1215 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
TPM1-211ENST00000558314 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 TNKSO95271 1327 aa18.19■□□□□ 0.5
TPM1-211ENST00000558314 DUSP28Q4G0W2 176 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 DSCC1Q9BVC3 393 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 LRRC37A2A6NM11 1700 aa18.18■□□□□ 0.5
TPM1-211ENST00000558314 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.17■□□□□ 0.5
TPM1-211ENST00000558314 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.17■□□□□ 0.5
TPM1-211ENST00000558314 SNHG28P0DPA3 235 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 FOSL2P15408 326 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 TMEM240Q5SV17 173 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 ADGRF4Q8IZF3 695 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 ENAHQ8N8S7 591 aaPredicted RBP18.17■□□□□ 0.5
TPM1-211ENST00000558314 MAFAQ8NHW3 353 aaPredicted RBP18.17■□□□□ 0.5
TPM1-211ENST00000558314 MORC4Q8TE76 937 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 COPS5Q92905 334 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 KRT23Q9C075 422 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 ZSWIM5Q9P217 1185 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 Q9Y3F1 56 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 WDR19Q8NEZ3 1342 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 COL6A3P12111 3177 aa18.17■□□□□ 0.5
TPM1-211ENST00000558314 LCTP09848 1927 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 GRXCR1A8MXD5 290 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 B4GALT4O60513 344 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 CD4P01730 458 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
TPM1-211ENST00000558314 DNAJB2P25686 324 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 PDE4AP27815 886 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 NKX3-2P78367 333 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 C16orf59Q7L2K0 433 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 IL25Q9H293 177 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 POLR3EQ9NVU0 708 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 GRIN2DO15399 1336 aa18.16■□□□□ 0.5
TPM1-211ENST00000558314 B4DLN1 442 aa18.15■□□□□ 0.5
TPM1-211ENST00000558314 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 CPT1AP50416 773 aa18.15■□□□□ 0.5
TPM1-211ENST00000558314 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 QRICH1Q2TAL8 776 aa18.15■□□□□ 0.5
TPM1-211ENST00000558314 BRDTQ58F21 947 aaPredicted RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 IFIT1BQ5T764 474 aaKnown RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 PSRC1Q6PGN9 363 aaPredicted RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.15■□□□□ 0.5
TPM1-211ENST00000558314 TIFAQ96CG3 184 aa18.15■□□□□ 0.5
TPM1-211ENST00000558314 CNNM2Q9H8M5 875 aa18.15■□□□□ 0.5
TPM1-211ENST00000558314 TRMT13Q9NUP7 481 aaKnown RBP18.15■□□□□ 0.5
TPM1-211ENST00000558314 CYP2C9P11712 490 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 PBX2P40425 430 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 TTC22Q5TAA0 569 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 SEPT14Q6ZU15 432 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 CHST3Q7LGC8 479 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 OTOP2Q7RTS6 562 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 FBXO11Q86XK2 927 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 SCLYQ96I15 445 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 TAAR1Q96RJ0 339 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 ABCB11O95342 1321 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 RAD50Q92878 1312 aa18.14■□□□□ 0.49
TPM1-211ENST00000558314 ZBBXA8MT70 800 aa18.13■□□□□ 0.49
TPM1-211ENST00000558314 FGBP02675 491 aa18.13■□□□□ 0.49
TPM1-211ENST00000558314 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
TPM1-211ENST00000558314 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
TPM1-211ENST00000558314 TRDNQ13061 729 aa18.13■□□□□ 0.49
TPM1-211ENST00000558314 GRIN2CQ14957 1233 aa18.13■□□□□ 0.49
TPM1-211ENST00000558314 DNERQ8NFT8 737 aa18.13■□□□□ 0.49
TPM1-211ENST00000558314 MTG1Q9BT17 334 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms