RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 KRT10P13645 584 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 ATICP31939 592 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 CEP19Q96LK0 163 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 FAM210AQ96ND0 272 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 MRPL40Q9NQ50 206 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 ARMCX3Q9UH62 379 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 KRT75O95678 551 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 USP14P54578 494 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 MPHOSPH6Q99547 160 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 IPO5O00410 1097 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 CCNT1O60563 726 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 ABCB4P21439 1286 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 CATSPER1Q8NEC5 780 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 LRRC37BQ96QE4 947 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 EXOC3O60645 756 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TNNI3KQ59H18 835 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZNF653Q96CK0 615 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ETNK1Q9HBU6 452 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 FPGT-TNNI3KV9GXZ4 949 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 KDM3AQ9Y4C1 1321 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 E7EWF7 191 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 MYL1P05976 194 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 PLCG2P16885 1265 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 STX1BP61266 288 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 CDR2Q01850 454 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRIM56Q9BRZ2 755 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 MFAP3LO75121 409 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 SERPINI2O75830 405 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TMED2Q15363 201 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZNF827Q17R98 1081 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRIM15Q9C019 465 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 E9PMD0 336 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TTI1O43156 1089 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TXKP42681 527 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TESK2Q96S53 571 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
CSPG4P12-201ENST00000558282 ABCC4O15439 1325 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 PODXLO00592 558 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 DIAPH2O60879 1101 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 MT-ND3P03897 115 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 ICA1LQ8NDH6 482 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 UIMC1Q96RL1 719 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 CYTH2Q99418 400 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZFP69BQ9UJL9 534 aa12.77□□□□□ -0.36
CSPG4P12-201ENST00000558282 A2MP01023 1474 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 hCG_2014768A0A024R1R8 64 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 E7ENQ6 273 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 CCDC159P0C7I6 412 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 MID2Q9UJV3 735 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 ANAPC5Q9UJX4 755 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 APOA1P02647 267 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 ANXA1P04083 346 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 HOXB7P09629 217 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 BFSP1Q12934 665 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 HAUS5O94927 633 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 NAA30Q147X3 362 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 RSPH3Q86UC2 560 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 AGGF1Q8N302 714 aaeCLIP12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 STAMQ92783 540 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 PHKBQ93100 1093 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 CNOT6LQ96LI5 555 aaKnown RBP12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
CSPG4P12-201ENST00000558282 DYMQ7RTS9 669 aa12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 HIC2Q96JB3 615 aa12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 KIF2CQ99661 725 aa12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P12-201ENST00000558282 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms