RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 STRIP1Q5VSL9 837 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 ASAP3Q8TDY4 903 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 DPF3Q92784 378 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
TRPM1-206ENST00000558212 CLMNQ96JQ2 1002 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 RHOVQ96L33 236 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 TRIM56Q9BRZ2 755 aaKnown RBP8.35□□□□□ -1.07
TRPM1-206ENST00000558212 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 KBTBD4Q9NVX7 518 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 PPP2R3BQ9Y5P8 575 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 SSC5DA1L4H1 1573 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 FBXO24O75426 580 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 GJA8P48165 433 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 IREB2P48200 963 aaKnown RBP8.34□□□□□ -1.07
TRPM1-206ENST00000558212 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 UBXN4Q92575 508 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 PLEKHF1Q96S99 279 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 PTPN18Q99952 460 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 HTATIP2Q9BUP3 242 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 DEFB129Q9H1M3 183 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 CCSER2Q9H7U1 834 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 FZD1Q9UP38 647 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 UNC80Q8N2C7 3258 aa8.34□□□□□ -1.07
TRPM1-206ENST00000558212 SMARCA5O60264 1052 aaPredicted RBP8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ALBP02768 609 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ALAS2P22557 587 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 PWP1Q13610 501 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ZNF423Q2M1K9 1284 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 SUPT20HL1Q3ZLR7 823 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ANKRD18AQ8IVF6 992 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
TRPM1-206ENST00000558212 SHISA4Q96DD7 197 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 MXD3Q9BW11 206 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 COA1Q9GZY4 146 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 NR2E3Q9Y5X4 410 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ECM29Q5VYK3 1845 aa8.33□□□□□ -1.08
TRPM1-206ENST00000558212 ZNF804BA4D1E1 1349 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
TRPM1-206ENST00000558212 OIP5O43482 229 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
TRPM1-206ENST00000558212 PRMT2P55345 433 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 RPS26P62854 115 aaKnown RBP8.32□□□□□ -1.08
TRPM1-206ENST00000558212 KIF22Q14807 665 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 UBE2Q1Q7Z7E8 422 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 PHC3Q8NDX5 983 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 TMEM74Q96NL1 305 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 PNNQ9H307 717 aaKnown RBP8.32□□□□□ -1.08
TRPM1-206ENST00000558212 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
TRPM1-206ENST00000558212 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 PAGE1O75459 146 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 WDHD1O75717 1129 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 RGS9O75916 674 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 EPHA1P21709 976 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 GARTP22102 1010 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 TNNI2P48788 182 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 LIG3P49916 1009 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 AFF1P51825 1210 aaKnown RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 PCDH1Q08174 1060 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 DLGAP5Q15398 846 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 TTLL5Q6EMB2 1281 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 AGMOQ6ZNB7 445 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 KIAA0825Q8IV33 1275 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 RASGRP4Q8TDF6 673 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-206ENST00000558212 OTOFQ9HC10 1997 aa8.31□□□□□ -1.08
TRPM1-206ENST00000558212 TM4SF5O14894 197 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 MYO1BO43795 1136 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 PDE8AO60658 829 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 HOXB7P09629 217 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 CCT4P50991 539 aaKnown RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 GTF2A2P52657 109 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 LACTBP83111 547 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 COL9A3Q14050 684 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 BRI3BPQ8WY22 251 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 OPTNQ96CV9 577 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 SPATA32Q96LK8 384 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 BSDC1Q9NW68 430 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-206ENST00000558212 HYPKQ9NX55 129 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
TRPM1-206ENST00000558212 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
TRPM1-206ENST00000558212 SHISA8B8ZZ34 492 aa8.29□□□□□ -1.08
TRPM1-206ENST00000558212 H3BRJ5 948 aa8.29□□□□□ -1.08
TRPM1-206ENST00000558212 TLR2O60603 784 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms