RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 PDE1AP54750 535 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 NR5A1Q13285 461 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 HABP4Q5JVS0 413 aaKnown RBP8.98□□□□□ -0.97
SPG11-205ENST00000558080 FAM83BQ5T0W9 1011 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 MAP3K21Q5TCX8 1036 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 DPP9Q86TI2 863 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 ZNF444Q8N0Y2 327 aaPredicted RBP8.98□□□□□ -0.97
SPG11-205ENST00000558080 NPLOC4Q8TAT6 608 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 NUP88Q99567 741 aaPredicted RBP8.98□□□□□ -0.97
SPG11-205ENST00000558080 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 LNPKQ9C0E8 428 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 RWDD1Q9H446 243 aaPredicted RBP8.98□□□□□ -0.97
SPG11-205ENST00000558080 GOPCQ9HD26 462 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 FBXO28Q9NVF7 368 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 CLIP2Q9UDT6 1046 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 STAP2Q9UGK3 403 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 ROBO3Q96MS0 1386 aa8.98□□□□□ -0.97
SPG11-205ENST00000558080 ZIC2O95409 532 aaPredicted RBP8.97□□□□□ -0.97
SPG11-205ENST00000558080 IGHDP01880 384 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 CAPN2P17655 700 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 CNGA1P29973 690 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 GRB14Q14449 540 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 TMEM132BQ14DG7 1078 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 FAM47AQ5JRC9 791 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 MFSD14CQ5VZR4 134 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 NECAB2Q7Z6G3 386 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 MB21D1Q8N884 522 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 SHCBP1Q8NEM2 672 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 NAPBQ9H115 298 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 NYAP2Q9P242 653 aa8.97□□□□□ -0.97
SPG11-205ENST00000558080 LAMA4Q16363 1823 aa8.96□□□□□ -0.97
SPG11-205ENST00000558080 SOBPA7XYQ1 873 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 F5H6K3 240 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 STRNO43815 780 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 COBLO75128 1261 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 NDUFB10O96000 172 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 SLC3A2P08195 630 aaKnown RBP8.96□□□□□ -0.98
SPG11-205ENST00000558080 NR3C2P08235 984 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 ADORA2AP29274 412 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 CYP2C19P33261 490 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 TFAP4Q01664 338 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 CTDSPL2Q05D32 466 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 KLRC3Q07444 240 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 PPARAQ07869 468 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 AAMPQ13685 434 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 ARID5BQ14865 1188 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 VPS53Q5VIR6 699 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 RILPL2Q969X0 211 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 CHMP4CQ96CF2 233 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 EVI5LQ96CN4 794 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 CEP95Q96GE4 821 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 MROH8Q9H579 483 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 ZNF287Q9HBT7 754 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 INCENPQ9NQS7 918 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 OGDHLQ9ULD0 1010 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 PPP1R9AQ9ULJ8 1098 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 NR2E3Q9Y5X4 410 aa8.96□□□□□ -0.98
SPG11-205ENST00000558080 IGKV6D-41A0A0C4DH26 115 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 VWA5AO00534 786 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 FOXP2O15409 715 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 SLC25A27O95847 323 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 HOXC6P09630 235 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 TSPY3P0CV98 308 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 TSPY8P0CW00 308 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 FCER1AP12319 257 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 STAT3P40763 770 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 GRM5P41594 1212 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 PDE4BQ07343 736 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 BPHLQ86WA6 291 aaPredicted RBP8.95□□□□□ -0.98
SPG11-205ENST00000558080 SMC5Q8IY18 1101 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 LRRC47Q8N1G4 583 aaKnown RBP8.95□□□□□ -0.98
SPG11-205ENST00000558080 TRPV1Q8NER1 839 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 FAM227BQ96M60 508 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 SLF1Q9BQI6 1058 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 C11orf49Q9H6J7 331 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 MTMR4Q9NYA4 1195 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 ISY1Q9ULR0 285 aaKnown RBP8.95□□□□□ -0.98
SPG11-205ENST00000558080 ADAMTS5Q9UNA0 930 aa8.95□□□□□ -0.98
SPG11-205ENST00000558080 BAZ2BQ9UIF8 2168 aaKnown RBP8.95□□□□□ -0.98
SPG11-205ENST00000558080 LCTP09848 1927 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 A0A0D9SFI3 127 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 TTLL1O95922 423 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 PGK2P07205 417 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 NMIQ13287 307 aaPredicted RBP8.94□□□□□ -0.98
SPG11-205ENST00000558080 PRAMEF19Q5SWL8 479 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 CHD1LQ86WJ1 897 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 RIOX2Q8IUF8 465 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 C7orf61Q8IZ16 206 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 CPXCR1Q8N123 301 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 REPS2Q8NFH8 660 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 MKL1Q969V6 931 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 MMP19Q99542 508 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 HELLSQ9NRZ9 838 aa8.94□□□□□ -0.98
SPG11-205ENST00000558080 SLC5A4Q9NY91 659 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms