RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PHIPQ8WWQ0 1821 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 PP2D1A8MPX8 630 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 C19orf81C9J6K1 198 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 CTAGE5O15320 804 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 ICAM1P05362 532 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 CCDC192P0DO97 292 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 L1TD1Q5T7N2 865 aaKnown RBP23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 FCHSD1Q86WN1 690 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 ATG4CQ96DT6 458 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 C12orf42Q96LP6 360 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 SLC38A10Q9HBR0 1119 aa23.16■■□□□ 1.3
SNRPA1-205ENST00000558036 OR52Z1P0C646 297 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 OTUD5Q96G74 571 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 HOMER2Q9NSB8 354 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 SOCS7O14512 581 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 UIMC1Q96RL1 719 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 RRAGCQ9HB90 399 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 TMOD4Q9NZQ9 345 aa23.15■■□□□ 1.3
SNRPA1-205ENST00000558036 OTOFQ9HC10 1997 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 FOXN1O15353 648 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 AP3B2Q13367 1082 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 SASS6Q6UVJ0 657 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 GJA10Q969M2 543 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 ZNF408Q9H9D4 720 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 SERTAD1Q9UHV2 236 aa23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 MRPL11Q9Y3B7 192 aaKnown RBP23.14■■□□□ 1.3
SNRPA1-205ENST00000558036 WDR90Q96KV7 1748 aa23.14■■□□□ 1.29
SNRPA1-205ENST00000558036 LAD1O00515 517 aa23.14■■□□□ 1.29
SNRPA1-205ENST00000558036 TRAF1Q13077 416 aa23.14■■□□□ 1.29
SNRPA1-205ENST00000558036 DHX58Q96C10 678 aa23.14■■□□□ 1.29
SNRPA1-205ENST00000558036 TIGD1Q96MW7 591 aa23.14■■□□□ 1.29
SNRPA1-205ENST00000558036 PAPPA2Q9BXP8 1791 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 VWA5AO00534 786 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 IRF6O14896 467 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 ALAS1P13196 640 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 PNOCQ13519 176 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 CALCRLQ16602 461 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 ANKRD13AQ8IZ07 590 aa23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 DDX25Q9UHL0 483 aaKnown RBP23.13■■□□□ 1.29
SNRPA1-205ENST00000558036 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 NFIBO00712 420 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 LONP1P36776 959 aaKnown RBP23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 PRPHP41219 470 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 TECP42680 631 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 TXKP42681 527 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 ARHGAP4P98171 946 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 TREML2Q5T2D2 321 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 GRAMD1CQ8IYS0 662 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 ABCB11O95342 1321 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 GCOM1H8Y6P7 765 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 POLR2MP0CAP2 368 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 PPP4R3AQ6IN85 833 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 CRYGNQ8WXF5 182 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 KIAA1468Q9P260 1216 aa23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 CTDP1Q9Y5B0 961 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-205ENST00000558036 ACTN4O43707 911 aaKnown RBP23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 ANO6Q4KMQ2 910 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 BIN1O00499 593 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 ZBED4O75132 1171 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 UBXN2AP68543 259 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 MUM1L1Q5H9M0 696 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 CATSPERGQ6ZRH7 1159 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 ZNF526Q8TF50 670 aaPredicted RBP23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 CLEC4DQ8WXI8 215 aa23.11■■□□□ 1.29
SNRPA1-205ENST00000558036 FOSP01100 380 aaPredicted RBP23.1■■□□□ 1.29
SNRPA1-205ENST00000558036 SREBF1P36956 1147 aa23.1■■□□□ 1.29
SNRPA1-205ENST00000558036 ORC2Q13416 577 aaPredicted RBP23.1■■□□□ 1.29
SNRPA1-205ENST00000558036 SH3D19Q5HYK7 790 aa23.1■■□□□ 1.29
SNRPA1-205ENST00000558036 MYH7BA7E2Y1 1941 aa23.1■■□□□ 1.29
SNRPA1-205ENST00000558036 DSG3P32926 999 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 USP11P51784 963 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 COG2Q14746 738 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 KARSQ15046 597 aaKnown RBP23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 ZRSR1Q15695 479 aaKnown RBP23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 ERO1BQ86YB8 467 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 DNAJC25Q9H1X3 360 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 RIPK3Q9Y572 518 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 ISM2Q6H9L7 571 aa23.09■■□□□ 1.29
SNRPA1-205ENST00000558036 SPDYE5A6NIY4 337 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 FAM86B1E9PN63 330 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 FAM86B2P0C5J1 330 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 PRR29P0C7W0 189 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 GCFC2P16383 781 aaKnown RBP23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 MDM2Q00987 491 aaPredicted RBP23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 PPATQ06203 517 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 GADL1Q6ZQY3 521 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 ARMC9Q7Z3E5 817 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 HAS1Q92839 578 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 PLIN2Q99541 437 aa23.08■■□□□ 1.29
SNRPA1-205ENST00000558036 PRR16Q569H4 304 aa23.08■■□□□ 1.28
SNRPA1-205ENST00000558036 MCTP2Q6DN12 878 aa23.08■■□□□ 1.28
SNRPA1-205ENST00000558036 REPS2Q8NFH8 660 aa23.08■■□□□ 1.28
SNRPA1-205ENST00000558036 CYP2W1Q8TAV3 490 aa23.08■■□□□ 1.28
SNRPA1-205ENST00000558036 OPTNQ96CV9 577 aa23.08■■□□□ 1.28
SNRPA1-205ENST00000558036 ZFP91Q96JP5 570 aaPredicted RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms