RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SMC2O95347 1197 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 TDP2O95551 362 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 ICAM1P05362 532 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 NF2P35240 595 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 UBA7P41226 1012 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 NLRP12P59046 1061 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-233ENST00000557529 KRT26Q7Z3Y9 468 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 LDHDQ86WU2 507 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 EHMT1Q9H9B1 1298 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 CBX8Q9HC52 389 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
SHMT2-233ENST00000557529 CYP3A7-CYP3A51PA0A087WV96 503 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 A0A087X0B3 334 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 ADM5C9JUS6 153 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 CYP3A7P24462 503 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 SREBF1P36956 1147 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 IREB2P48200 963 aaKnown RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 PNOCQ13519 176 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 POTEDQ86YR6 584 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 ERCC4Q92889 916 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 PPP1R9BQ96SB3 815 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 RPAP3Q9H6T3 665 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 TMOD4Q9NZQ9 345 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 DDX25Q9UHL0 483 aaKnown RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 PPP1R9AQ9ULJ8 1098 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 CTDP1Q9Y5B0 961 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-233ENST00000557529 CSADQ9Y600 493 aa14.11□□□□□ -0.15
SHMT2-233ENST00000557529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-233ENST00000557529 OPLAHO14841 1288 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SLC37A4O43826 429 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 EDIL3O43854 480 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 ZBED4O75132 1171 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 FLOT1O75955 427 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 PDIA5Q14554 519 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 E2F4Q16254 413 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 NT5DC1Q5TFE4 455 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-233ENST00000557529 C11orf57Q6ZUT1 292 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SH3RF1Q7Z6J0 888 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SAMD3Q8N6K7 520 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 IGSF22Q8N9C0 903 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 TRIML1Q8N9V2 468 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 CRYGNQ8WXF5 182 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 BPIFA3Q9BQP9 254 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 CUEDC2Q9H467 287 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 SLC38A10Q9HBR0 1119 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 CCPG1Q9ULG6 757 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 PCDHA5Q9Y5H7 936 aa14.1□□□□□ -0.15
SHMT2-233ENST00000557529 GOLGB1Q14789 3259 aaKnown RBP14.1□□□□□ -0.15
SHMT2-233ENST00000557529 MARCH6O60337 910 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 CYP3A4P08684 503 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 CIITAP33076 1130 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 STAT6P42226 847 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 TXKP42681 527 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 LUZP1Q86V48 1076 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PNMA8AQ86V59 439 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 RASSF8Q8NHQ8 419 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PAGE5Q96GU1 130 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 MAGEF1Q9HAY2 307 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 DISC1Q9NRI5 854 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 FZD1Q9UP38 647 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 AFG3L2Q9Y4W6 797 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 ZNF536O15090 1300 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 BECN2A8MW95 431 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 GOLGA6L19H0YKK7 550 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 BIN1O00499 593 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 TBX3O15119 743 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 FOXN1O15353 648 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 CFBP00751 764 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 TECP42680 631 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 HMGCS2P54868 508 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PRKG1Q13976 671 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 VGLL4Q14135 290 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 IQCB1Q15051 598 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 Q4G0T1 1027 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 RRAGBQ5VZM2 374 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PDXDC2PQ6P474 469 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 CABP7Q86V35 215 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 SPATA20Q8TB22 786 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 PDLIM2Q96JY6 352 aa14.09□□□□□ -0.15
SHMT2-233ENST00000557529 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 MAP3K20Q9NYL2 800 aaKnown RBP14.09□□□□□ -0.15
SHMT2-233ENST00000557529 LRWD1Q9UFC0 647 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms