RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 TRMT44Q8IYL2 757 aaKnown RBP17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 SLC26A6Q9BXS9 759 aa17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 DIS3Q9Y2L1 958 aaKnown RBP17.15■□□□□ 0.34
VIPAS39-210ENST00000557466 ST18O60284 1047 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 CYP2C19P33261 490 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 GHRHRQ02643 423 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 PKN1Q16512 942 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 TYW1BQ6NUM6 668 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 MCF2L2Q86YR7 1114 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 ZNF333Q96JL9 665 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
VIPAS39-210ENST00000557466 STXBP3O00186 592 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 DTNBO60941 627 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 CTDNEP1O95476 244 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 CFBP00751 764 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 SCG2P13521 617 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 HSD17B4P51659 736 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 MAF1Q9H063 256 aa17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
VIPAS39-210ENST00000557466 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 MYCP01106 439 aaPredicted RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 PRKAR2AP13861 404 aaKnown RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 NAPAP54920 295 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 UBXN2AP68543 259 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 MTFR1Q15390 333 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 MAP3K21Q5TCX8 1036 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 MFSD14CQ5VZR4 134 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 TINF2Q9BSI4 451 aa17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
VIPAS39-210ENST00000557466 HTTP42858 3142 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 CDKL5O76039 1030 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 ALDH5A1P51649 535 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 CACNB2Q08289 660 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 CCDC83Q8IWF9 413 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 TAAR1Q96RJ0 339 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
VIPAS39-210ENST00000557466 KIAA1217Q5T5P2 1943 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 DEXIO95424 95 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 CYBAP13498 195 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 CCL5P13501 91 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 MSL3Q8N5Y2 521 aaKnown RBP17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
VIPAS39-210ENST00000557466 MEIS2O14770 477 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 JAK2O60674 1132 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 UBE2SQ16763 222 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 PRAMEF19Q5SWL8 479 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 PSTPIP2Q9H939 334 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
VIPAS39-210ENST00000557466 RPTORQ8N122 1335 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 ASB14A6NK59 587 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 CAPN15O75808 1086 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 ADCY7P51828 1080 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 FCHSD1Q86WN1 690 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 MORC4Q8TE76 937 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 CUL5Q93034 780 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 HMX1Q9NP08 348 aaPredicted RBP17.08■□□□□ 0.32
VIPAS39-210ENST00000557466 LOC102724159A0A0B4J2E5 919 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 ESYT2A0FGR8 921 aa17.07■□□□□ 0.32
VIPAS39-210ENST00000557466 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms