RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 PAK6Q9NQU5 681 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 ASTN1O14525 1302 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 SYNGAP1Q96PV0 1343 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 hCG_1642624A0A1W2PR95 340 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 SOWAHBA6NEL2 793 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 IGHA2P01877 340 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 GJB1P08034 283 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 CNGA1P29973 690 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 EVCP57679 992 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 MCF2L2Q86YR7 1114 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 MSL3Q8N5Y2 521 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 PURBQ96QR8 312 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 CNPY2Q9Y2B0 182 aa12.24□□□□□ -0.45
HNRNPC-232ENST00000557442 OPLAHO14841 1288 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 CFBP00751 764 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 PDIA3P30101 505 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 ALDH5A1P51649 535 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 NEK4P51957 841 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 AK2P54819 239 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 CCT2P78371 535 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 TRPV1Q8NER1 839 aa12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 FAM217BQ9NTX9 383 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-232ENST00000557442 ASB14A6NK59 587 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 EN2P19622 333 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 GJA8P48165 433 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 RBM25P49756 843 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 FUT2Q10981 343 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 STK3Q13188 491 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 HEATR3Q7Z4Q2 680 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.455e-6■■□□□ 13.3
HNRNPC-232ENST00000557442 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 ZNF274Q96GC6 653 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-232ENST00000557442 MSCO60682 206 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 SGPL1O95470 568 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 SNAI1O95863 264 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 HOXA13P31271 388 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 HSD17B4P51659 736 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 MAF1Q9H063 256 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 ABHD16BQ9H3Z7 469 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 DDX20Q9UHI6 824 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-232ENST00000557442 WDR81Q562E7 1941 aa12.21□□□□□ -0.46
HNRNPC-232ENST00000557442 GCOM1H8Y6P7 765 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 CPLX1O14810 134 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 SEPT4O43236 478 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 TFRCP02786 760 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 POLR2MP0CAP2 368 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 AKR1A1P14550 325 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 AKAP17AQ02040 695 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 GHRHRQ02643 423 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 ANO1Q5XXA6 986 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 WWC2Q6AWC2 1192 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 FBXO16Q8IX29 292 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 DNERQ8NFT8 737 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 PHKBQ93100 1093 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 RMDN3Q96TC7 470 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 KIF2CQ99661 725 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 SLKQ9H2G2 1235 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
HNRNPC-232ENST00000557442 CEP290O15078 2479 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 B4DLN1 442 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 hCG_1984214I3L0E3 225 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 IFNAR1P17181 557 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 NAPAP54920 295 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 PDE4DQ08499 809 aa12.19□□□□□ -0.46
HNRNPC-232ENST00000557442 ACVR2BQ13705 512 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms