RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TERF1P54274 439 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 HSP90AA4PQ58FG1 418 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 KCNV1Q6PIU1 500 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 DCAF4Q8WV16 495 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 GTPBP6O43824 516 aaPredicted RBP9.15□□□□□ -0.94
CHD8-213ENST00000557364 RASSF2P50749 326 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 CDC42EP1Q00587 391 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 KYAT1Q16773 422 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD8-213ENST00000557364 VCX3BQ9H321 246 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 VPS54Q9P1Q0 977 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 TRIM35Q9UPQ4 493 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 ABL1P00519 1130 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 ASPHQ12797 758 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 BZW1Q7L1Q6 419 aaKnown RBP9.15□□□□□ -0.94
CHD8-213ENST00000557364 ACCSQ96QU6 501 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 TRIM62Q9BVG3 475 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 EDEM3Q9BZQ6 932 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 FOXP1Q9H334 677 aaPredicted RBP9.15□□□□□ -0.94
CHD8-213ENST00000557364 KRT24Q2M2I5 525 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 CCDC105Q8IYK2 499 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
CHD8-213ENST00000557364 RPS6KA2Q15349 733 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 EPSTI1Q96J88 318 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 VPS16Q9H269 839 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
CHD8-213ENST00000557364 SPHKAPQ2M3C7 1700 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 AK9Q5TCS8 1911 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 SPDYE16A6NNV3 312 aaPredicted RBP9.15□□□□□ -0.95
CHD8-213ENST00000557364 NSFP46459 744 aaKnown RBP9.15□□□□□ -0.95
CHD8-213ENST00000557364 TNFAIP2Q03169 654 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 MCM6Q14566 821 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 SPDYE2Q495Y8 402 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 FAM47AQ5JRC9 791 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 SYDE2Q5VT97 1194 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 LRRC47Q8N1G4 583 aaKnown RBP9.15□□□□□ -0.95
CHD8-213ENST00000557364 CCHCR1Q8TD31 782 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 TTLL3Q9Y4R7 772 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 ARHGAP4P98171 946 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.95
CHD8-213ENST00000557364 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 URGCPQ8TCY9 931 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 TTC25Q96NG3 672 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 ABCC12Q96J65 1359 aa9.15□□□□□ -0.95
CHD8-213ENST00000557364 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 LDHAP00338 332 aaKnown RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 TRIM56Q9BRZ2 755 aaKnown RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 MMP10P09238 476 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 MMP14P50281 582 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 ARL13BQ3SXY8 428 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 NT5C1BQ96P26 610 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 IFIH1Q9BYX4 1025 aaKnown RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 TOPORSQ9NS56 1045 aaPredicted RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 PER1O15534 1290 aaPredicted RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 PFKFB2O60825 505 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 HHATQ5VTY9 493 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 DENND2CQ68D51 928 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 DYMQ7RTS9 669 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 CYP2J2P51589 502 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 BEND3Q5T5X7 828 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 NLRP7Q8WX94 980 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 PHKBQ93100 1093 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 NUF2Q9BZD4 464 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 HOMER3Q9NSC5 361 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 TLDC2A0PJX2 215 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 WDR46O15213 610 aaKnown RBP9.14□□□□□ -0.95
CHD8-213ENST00000557364 SATB1Q01826 763 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 PPP4R3CPQ6ZMV5 832 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 CACNA2D3Q8IZS8 1091 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 SPON1Q9HCB6 807 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 NARFQ9UHQ1 456 aa9.14□□□□□ -0.95
CHD8-213ENST00000557364 KRT3P12035 628 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 C10orf76Q5T2E6 689 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 KRT12Q99456 494 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 PCDHA4Q9UN74 947 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 SPATA31A3Q5VYP0 1347 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 FRMPD2Q68DX3 1309 aaPredicted RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 CBX1P83916 185 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 PSMD2Q13200 908 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 KIAA1586Q9HCI6 787 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 INO80B-WBP1J3KQ70 363 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 HSPD1P10809 573 aaKnown RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 FANCCQ00597 558 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 FAM26FQ5R3K3 315 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 MYSM1Q5VVJ2 828 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 FEM1BQ9UK73 627 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 NFE2L3Q9Y4A8 694 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 NLRP10Q86W26 655 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 RNF139Q8WU17 664 aa9.13□□□□□ -0.95
CHD8-213ENST00000557364 DDX17Q92841 729 aaKnown RBP9.13□□□□□ -0.95
CHD8-213ENST00000557364 GREM2Q9H772 168 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms