RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
VPS33B-206ENST00000557358 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
VPS33B-206ENST00000557358 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
VPS33B-206ENST00000557358 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
VPS33B-206ENST00000557358 PRKAG2Q9UGJ0 569 aa16■□□□□ 0.15
VPS33B-206ENST00000557358 NAP1L2Q9ULW6 460 aaPredicted RBP16■□□□□ 0.15
VPS33B-206ENST00000557358 CEP290O15078 2479 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 PGK1P00558 417 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 CFBP00751 764 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-206ENST00000557358 COL6A1P12109 1028 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 HSPA4P34932 840 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-206ENST00000557358 SLC30A10Q6XR72 485 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 SGMS1Q86VZ5 419 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 MICU3Q86XE3 530 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 C7orf61Q8IZ16 206 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 CUL5Q93034 780 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 MTMR8Q96EF0 704 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 FGD4Q96M96 766 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
VPS33B-206ENST00000557358 PIGSQ96S52 555 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 SPZ1Q9BXG8 430 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 LRRC2Q9BYS8 371 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 SENP2Q9HC62 589 aa15.99■□□□□ 0.15
VPS33B-206ENST00000557358 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
VPS33B-206ENST00000557358 MOXD2PA6NHM9 499 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 H0YGN5 161 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 ZBTB43O43298 467 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 MNX1P50219 401 aaPredicted RBP15.98■□□□□ 0.15
VPS33B-206ENST00000557358 ARHGEF16Q5VV41 709 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 FANCBQ8NB91 859 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
VPS33B-206ENST00000557358 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 CCDC196A0A1B0GTZ2 297 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-206ENST00000557358 POLR2MP0CAP2 368 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 ADCYAP1R1P41586 468 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-206ENST00000557358 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 GNASQ5JWF2 1037 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 FBXO16Q8IX29 292 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-206ENST00000557358 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 SYTL5Q8TDW5 730 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-206ENST00000557358 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 PIBF1Q8WXW3 757 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 GLT1D1Q96MS3 346 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 RMDN3Q96TC7 470 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-206ENST00000557358 Q9Y3F1 56 aa15.97■□□□□ 0.15
VPS33B-206ENST00000557358 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.15
VPS33B-206ENST00000557358 RCAN1P53805 252 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 GJA9P57773 515 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 EXOSC10Q01780 885 aaKnown RBP15.96■□□□□ 0.15
VPS33B-206ENST00000557358 STXBP2Q15833 593 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 RTN1Q16799 776 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 TLK2Q86UE8 772 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 KCNB2Q92953 911 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 STARD7Q9NQZ5 370 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 SNX14Q9Y5W7 946 aa15.96■□□□□ 0.15
VPS33B-206ENST00000557358 KLF18A0A0U1RQI7 1052 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 GOLGA8AA7E2F4 631 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 GOLGA8BA8MQT2 603 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 DYNC1LI2O43237 492 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-206ENST00000557358 RXRAP19793 462 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 CASTP20810 708 aaKnown RBP15.95■□□□□ 0.14
VPS33B-206ENST00000557358 CST5P28325 142 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-206ENST00000557358 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 LRRC26Q2I0M4 334 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 ADCK5Q3MIX3 580 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 APOA5Q6Q788 366 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 SLC39A5Q6ZMH5 540 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 FERMT2Q96AC1 680 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 LENG1Q96BZ8 264 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-206ENST00000557358 PURBQ96QR8 312 aaKnown RBP15.95■□□□□ 0.14
VPS33B-206ENST00000557358 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 KATNBL1Q9H079 304 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
VPS33B-206ENST00000557358 MROH7Q68CQ1 1323 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 CYTH3O43739 400 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 ADAMTS4O75173 837 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 CABYRO75952 493 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 HSD17B4P51659 736 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 ACLYP53396 1101 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 RTP1P59025 263 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 KCNA10Q16322 511 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
VPS33B-206ENST00000557358 DUSP28Q4G0W2 176 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 Q6ZUG5 572 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 SMARCC2Q8TAQ2 1214 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 TAAR1Q96RJ0 339 aa15.94■□□□□ 0.14
VPS33B-206ENST00000557358 LBHD1Q9BQE6 289 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-206ENST00000557358 UPF3AQ9H1J1 476 aaKnown RBP15.94■□□□□ 0.14
VPS33B-206ENST00000557358 CYP46A1Q9Y6A2 500 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms