RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GPATCH4Q5T3I0 446 aaKnown RBP18.65■□□□□ 0.58
TUBB3-213ENST00000557262 RNF207Q6ZRF8 634 aa18.65■□□□□ 0.58
TUBB3-213ENST00000557262 TMEM199Q8N511 208 aa18.65■□□□□ 0.58
TUBB3-213ENST00000557262 PTGS1P23219 599 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 CALML3P27482 149 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 C16orf59Q7L2K0 433 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 IQCA1Q86XH1 822 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 ANKS1AQ92625 1134 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.64■□□□□ 0.57
TUBB3-213ENST00000557262 DSCC1Q9BVC3 393 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 TTYH1Q9H313 450 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-213ENST00000557262 NEDD4P46934 1319 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
TUBB3-213ENST00000557262 TMEM265A0A087WTH1 108 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 RBM47A0AV96 593 aaKnown RBP18.63■□□□□ 0.57
TUBB3-213ENST00000557262 KDM4AO75164 1064 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 CSF2RAP15509 400 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 TMEM240Q5SV17 173 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 MPHOSPH6Q99547 160 aaKnown RBP18.63■□□□□ 0.57
TUBB3-213ENST00000557262 PPP1R12CQ9BZL4 782 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
TUBB3-213ENST00000557262 RPS6P62753 249 aaKnown RBP18.62■□□□□ 0.57
TUBB3-213ENST00000557262 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
TUBB3-213ENST00000557262 SLC30A10Q6XR72 485 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 PNMA1Q8ND90 353 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 DNERQ8NFT8 737 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 UBA5Q9GZZ9 404 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 KAT14Q9H8E8 782 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 ZSWIM5Q9P217 1185 aa18.62■□□□□ 0.57
TUBB3-213ENST00000557262 EYSQ5T1H1 3165 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 B4DLN1 442 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 B4E1Z4 1266 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 CYP2C18P33260 490 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
TUBB3-213ENST00000557262 PDE4DQ08499 809 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 ZNF365Q70YC5 407 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 ZSCAN10Q96SZ4 725 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-213ENST00000557262 MAF1Q9H063 256 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 POLR3EQ9NVU0 708 aa18.61■□□□□ 0.57
TUBB3-213ENST00000557262 ACRP10323 421 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 PSMC6P62333 389 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 RASIP1Q5U651 963 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 MYLIPQ8WY64 445 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 KRT23Q9C075 422 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 CPVLQ9H3G5 476 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 HIPK3Q9H422 1215 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 IL23AQ9NPF7 189 aa18.6■□□□□ 0.57
TUBB3-213ENST00000557262 LCTP09848 1927 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.575e-7■□□□□ 10.7
TUBB3-213ENST00000557262 EDNRBP24530 442 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 DNAJB2P25686 324 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 CPT1AP50416 773 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 USH1GQ495M9 461 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 PSRC1Q6PGN9 363 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-213ENST00000557262 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.59■□□□□ 0.57
TUBB3-213ENST00000557262 ADGRF4Q8IZF3 695 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-213ENST00000557262 TRPV6Q9H1D0 765 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 CDH23Q9H251 3354 aa18.59■□□□□ 0.57
TUBB3-213ENST00000557262 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.57
TUBB3-213ENST00000557262 B4GALT4O60513 344 aa18.58■□□□□ 0.56
TUBB3-213ENST00000557262 FGBP02675 491 aa18.58■□□□□ 0.56
TUBB3-213ENST00000557262 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
TUBB3-213ENST00000557262 CDC37Q16543 378 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-213ENST00000557262 ASPRV1Q53RT3 343 aa18.58■□□□□ 0.56
TUBB3-213ENST00000557262 BRDTQ58F21 947 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-213ENST00000557262 OR6J1Q8NGC5 347 aa18.58■□□□□ 0.56
TUBB3-213ENST00000557262 MAFAQ8NHW3 353 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-213ENST00000557262 SCFD2Q8WU76 684 aa18.58■□□□□ 0.56
TUBB3-213ENST00000557262 GPHNQ9NQX3 736 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-213ENST00000557262 ABCB11O95342 1321 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 MYL3P08590 195 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
TUBB3-213ENST00000557262 SUPT20HL2P0C7V6 817 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 PPP2R5BQ15173 497 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 HERVK_113Q902F9 699 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 TBC1D5Q92609 795 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 MTG1Q9BT17 334 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-213ENST00000557262 NOC4LQ9BVI4 516 aaKnown RBP18.57■□□□□ 0.56
TUBB3-213ENST00000557262 ALDH8A1Q9H2A2 487 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-213ENST00000557262 ZNF576Q9H609 170 aa18.57■□□□□ 0.56
TUBB3-213ENST00000557262 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
TUBB3-213ENST00000557262 TNKSO95271 1327 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 KPNA6O60684 536 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 TXNP10599 105 aaKnown RBP18.56■□□□□ 0.56
TUBB3-213ENST00000557262 FOSL2P15408 326 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 CCL23P55773 120 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 GRIN2CQ14957 1233 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 MCF2L2Q86YR7 1114 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 RPUSD2Q8IZ73 545 aaKnown RBP18.56■□□□□ 0.56
TUBB3-213ENST00000557262 TIFAQ96CG3 184 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 UBAC1Q9BSL1 405 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms