RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 FBXO40Q9UH90 709 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 NOB1Q9ULX3 412 aaKnown RBP15.1■□□□□ 0.01
PSEN1-220ENST00000557037 TRPC6Q9Y210 931 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
PSEN1-220ENST00000557037 KMT2BQ9UMN6 2715 aaPredicted RBP15.09■□□□□ 0.01
PSEN1-220ENST00000557037 ACACBO00763 2458 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 CHD8Q9HCK8 2581 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 ASB14A6NK59 587 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 ATP2A1O14983 1001 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 CDK8P49336 464 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 GPNMBQ14956 572 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 COL19A1Q14993 1142 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 KIAA1211Q6ZU35 1233 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
PSEN1-220ENST00000557037 CCDC17Q96LX7 622 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 MTG1Q9BT17 334 aaPredicted RBP15.09■□□□□ 0.01
PSEN1-220ENST00000557037 GPR108Q9NPR9 543 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
PSEN1-220ENST00000557037 DBNLQ9UJU6 430 aaKnown RBP15.09■□□□□ 0.01
PSEN1-220ENST00000557037 Q9Y3F1 56 aa15.09■□□□□ 0.01
PSEN1-220ENST00000557037 DCHS1Q96JQ0 3298 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 STXBP3O00186 592 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 MBTPS2O43462 519 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 ZXDAP98168 799 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 DLX2Q07687 328 aaPredicted RBP15.08■□□□□ 0
PSEN1-220ENST00000557037 OS9Q13438 667 aaPredicted RBP15.08■□□□□ 0
PSEN1-220ENST00000557037 CNKSR3Q6P9H4 555 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 FSD1Q9BTV5 496 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
PSEN1-220ENST00000557037 IRF2BPLQ9H1B7 796 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
PSEN1-220ENST00000557037 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
PSEN1-220ENST00000557037 ZNF292O60281 2723 aa15.08■□□□□ 0
PSEN1-220ENST00000557037 BAHCC1Q9P281 2608 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 MED19A0JLT2 244 aaPredicted RBP15.07■□□□□ 0
PSEN1-220ENST00000557037 PRR23AA6NEV1 266 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 NDUFB10O96000 172 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 GNAI3P08754 354 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 GPM6BQ13491 265 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 EPC2Q52LR7 807 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 LCORLQ8N3X6 602 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 MRS2Q9HD23 443 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
PSEN1-220ENST00000557037 COG6Q9Y2V7 657 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 SCN10AQ9Y5Y9 1956 aa15.07■□□□□ 0
PSEN1-220ENST00000557037 USP17L12C9JPN9 530 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 USP17L21D6R901 530 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 PROB1E7EW31 1015 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 E9PSI1 815 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 PRKAB2O43741 272 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 AVPR2P30518 371 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 LRRFIP1Q32MZ4 808 aaKnown RBP15.06■□□□□ 0
PSEN1-220ENST00000557037 NFRKBQ6P4R8 1299 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 ACAD9Q9H845 621 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 INSL6Q9Y581 213 aa15.06■□□□□ 0
PSEN1-220ENST00000557037 ABHD14A-ACY1A0A1B0GW23 586 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 F5H6K3 240 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 NBNO60934 754 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 KDM4AO75164 1064 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 SELPP16109 830 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 KLRC3Q07444 240 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 PTGISQ16647 500 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.05■□□□□ -0
PSEN1-220ENST00000557037 LRRC8DQ7L1W4 858 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 OR6J1Q8NGC5 347 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 AFAP1L1Q8TED9 768 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 PURBQ96QR8 312 aaKnown RBP15.05■□□□□ -0
PSEN1-220ENST00000557037 API5Q9BZZ5 524 aaKnown RBP15.05■□□□□ -0
PSEN1-220ENST00000557037 RNF146Q9NTX7 359 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 SPTBN2O15020 2390 aa15.05■□□□□ -0
PSEN1-220ENST00000557037 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
PSEN1-220ENST00000557037 H3BNC9 293 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 PDE6AP16499 860 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 CPT1AP50416 773 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
PSEN1-220ENST00000557037 SMAD4Q13485 552 aaKnown RBP15.04■□□□□ -0
PSEN1-220ENST00000557037 CCDC155Q8N6L0 562 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
PSEN1-220ENST00000557037 WDR11Q9BZH6 1224 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 ARMT1Q9H993 441 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 VTA1Q9NP79 307 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 MYO15AQ9UKN7 3530 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 CHD6Q8TD26 2715 aa15.04■□□□□ -0
PSEN1-220ENST00000557037 CXCL10P02778 98 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 OAZ1P54368 228 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 IKBKEQ14164 716 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 SLC9C2Q5TAH2 1124 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 C12orf60Q5U649 245 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 C16orf86Q6ZW13 317 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 MYOCDQ8IZQ8 938 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 CAGE1Q8TC20 777 aa15.03■□□□□ -0
PSEN1-220ENST00000557037 DHX38Q92620 1227 aaKnown RBP15.03■□□□□ -0
PSEN1-220ENST00000557037 CEP250Q9BV73 2442 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 ZNF532Q9HCE3 1301 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 NCK2O43639 380 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms