RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 GOLGA6AQ9NYA3 693 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 SNX12Q9UMY4 172 aa12.7□□□□□ -0.38
SRP54-213ENST00000556994 XIRP1Q702N8 1843 aaKnown RBP12.69□□□□□ -0.38
SRP54-213ENST00000556994 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 NCK2O43639 380 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 TECP42680 631 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 DNAJC21Q5F1R6 531 aaKnown RBP12.69□□□□□ -0.38
SRP54-213ENST00000556994 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 AENQ8WTP8 325 aaKnown RBP12.69□□□□□ -0.38
SRP54-213ENST00000556994 IFIH1Q9BYX4 1025 aaKnown RBP12.69□□□□□ -0.38
SRP54-213ENST00000556994 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 PCDHA13Q9Y5I0 950 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 FLT1P17948 1338 aa12.69□□□□□ -0.38
SRP54-213ENST00000556994 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
SRP54-213ENST00000556994 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
SRP54-213ENST00000556994 SEMA6BQ9H3T3 888 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 ATP8A2Q9NTI2 1148 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 TCP11L1Q9NUJ3 509 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 BSDC1Q9NW68 430 aaPredicted RBP12.68□□□□□ -0.38
SRP54-213ENST00000556994 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 TACC1O75410 805 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 CCT5P48643 541 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 IRAK1P51617 712 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 TTC31Q49AM3 519 aaPredicted RBP12.68□□□□□ -0.38
SRP54-213ENST00000556994 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 DEF6Q9H4E7 631 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
SRP54-213ENST00000556994 SALL4Q9UJQ4 1053 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 JRKLQ9Y4A0 524 aa12.68□□□□□ -0.38
SRP54-213ENST00000556994 STXBP3O00186 592 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 KIF11P52732 1056 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 CCDC70Q6NSX1 233 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 OSBPL9Q96SU4 736 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 MKNK2Q9HBH9 465 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 LOC102724428A0A0B4J2F2 783 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 BUB1O43683 1085 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
SRP54-213ENST00000556994 MYL1P05976 194 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 DNA2P51530 1060 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 SIK1P57059 783 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 RRAGAQ7L523 313 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 TXNRD3Q86VQ6 643 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
SRP54-213ENST00000556994 MMGT1Q8N4V1 131 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 TSEN2Q8NCE0 465 aaKnown RBP12.67□□□□□ -0.38
SRP54-213ENST00000556994 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 POLD4Q9HCU8 107 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 BARHL2Q9NY43 387 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 PLAGL2Q9UPG8 496 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
SRP54-213ENST00000556994 PHLPP1O60346 1717 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 AKR1B10O60218 316 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 OR52Z1P0C646 297 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 CCDC181Q5TID7 509 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 DYMQ7RTS9 669 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 AMOTL1Q8IY63 956 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
SRP54-213ENST00000556994 CCDC47Q96A33 483 aaKnown RBP12.66□□□□□ -0.38
SRP54-213ENST00000556994 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 TSGA10Q9BZW7 698 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 A0A1W2PQJ5 194 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 ZPR1O75312 459 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 TSPY3P0CV98 308 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 TSPY8P0CW00 308 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 HIBADHP31937 336 aaKnown RBP12.66□□□□□ -0.38
SRP54-213ENST00000556994 KCNQ4P56696 695 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
SRP54-213ENST00000556994 GRM4Q14833 912 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 DGKHQ86XP1 1220 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 ARL8AQ96BM9 186 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
SRP54-213ENST00000556994 CAPS2Q9BXY5 557 aa12.66□□□□□ -0.38
SRP54-213ENST00000556994 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms