RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
LINC00239-201ENST00000556973 UBE2Q1Q7Z7E8 422 aa12.38□□□□□ -0.43
LINC00239-201ENST00000556973 BRF1Q92994 677 aa12.38□□□□□ -0.43
LINC00239-201ENST00000556973 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
LINC00239-201ENST00000556973 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
LINC00239-201ENST00000556973 FAM184BQ9ULE4 1060 aa12.38□□□□□ -0.43
LINC00239-201ENST00000556973 MCM3APO60318 1980 aa12.38□□□□□ -0.43
LINC00239-201ENST00000556973 CCDC196A0A1B0GTZ2 297 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
LINC00239-201ENST00000556973 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 SEC24BO95487 1268 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 AKR1A1P14550 325 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 ALDH5A1P51649 535 aaPredicted RBP12.37□□□□□ -0.43
LINC00239-201ENST00000556973 EVCP57679 992 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 GHRHRQ02643 423 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 RTN1Q16799 776 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 CMTR1Q8N1G2 835 aaKnown RBP12.37□□□□□ -0.43
LINC00239-201ENST00000556973 ARRDC4Q8NCT1 418 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 PURBQ96QR8 312 aaKnown RBP12.37□□□□□ -0.43
LINC00239-201ENST00000556973 NAP1L2Q9ULW6 460 aaPredicted RBP12.37□□□□□ -0.43
LINC00239-201ENST00000556973 ASTN1O14525 1302 aa12.37□□□□□ -0.43
LINC00239-201ENST00000556973 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
LINC00239-201ENST00000556973 GOLGA8AA7E2F4 631 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 GOLGA8BA8MQT2 603 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 CFBP00751 764 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 RARBP10826 455 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00239-201ENST00000556973 HSD17B4P51659 736 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 NECAB2Q7Z6G3 386 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
LINC00239-201ENST00000556973 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
LINC00239-201ENST00000556973 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 OPLAHO14841 1288 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 CDC27P30260 824 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 CCDC144BQ3MJ40 725 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 C8orf34Q49A92 452 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 ANO1Q5XXA6 986 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 IQSEC1Q6DN90 963 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 SYTL5Q8TDW5 730 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 IL17RAQ96F46 866 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 TAAR1Q96RJ0 339 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 ALDH8A1Q9H2A2 487 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
LINC00239-201ENST00000556973 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
LINC00239-201ENST00000556973 NID2Q14112 1375 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 GCOM1H8Y6P7 765 aaPredicted RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 DNM1LO00429 736 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 DUSP11O75319 330 aaKnown RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 POLR2MP0CAP2 368 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 PDIA3P30101 505 aaKnown RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 PDE4DQ08499 809 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 TOB2Q14106 344 aaPredicted RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 C11orf49Q9H6J7 331 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
LINC00239-201ENST00000556973 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
LINC00239-201ENST00000556973 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 COL6A1P12109 1028 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 EDNRBP24530 442 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 TNFAIP2Q03169 654 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 FUT2Q10981 343 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
LINC00239-201ENST00000556973 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 RNF180Q86T96 592 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
LINC00239-201ENST00000556973 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 Q9Y3F1 56 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 CNTNAP5Q8WYK1 1306 aa12.33□□□□□ -0.44
LINC00239-201ENST00000556973 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
LINC00239-201ENST00000556973 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
LINC00239-201ENST00000556973 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
LINC00239-201ENST00000556973 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 LRRC41Q15345 812 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 STXBP2Q15833 593 aa12.32□□□□□ -0.44
LINC00239-201ENST00000556973 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
LINC00239-201ENST00000556973 DPF3Q92784 378 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms