RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 CABYRO75952 493 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 ASGR1P07306 291 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 CLTBP09497 229 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 NKX3-2P78367 333 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 FSCN1Q16658 493 aaKnown RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 QRICH1Q2TAL8 776 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 TMEM67Q5HYA8 995 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 CCSAPQ6IQ19 270 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 CATIPQ7Z7H3 387 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 FBXO16Q8IX29 292 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 AMNQ9BXJ7 453 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 SEZ6LQ9BYH1 1024 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 JMJD4Q9H9V9 463 aa12.57□□□□□ -0.4
XRCC3-216ENST00000556682 GNEQ9Y223 722 aaKnown RBP12.57□□□□□ -0.4
XRCC3-216ENST00000556682 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-216ENST00000556682 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-216ENST00000556682 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 ADCY6O43306 1168 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 SMPD1P17405 629 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 DUSP28Q4G0W2 176 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 BRDTQ58F21 947 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-216ENST00000556682 RNF20Q5VTR2 975 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 TAPT1Q6NXT6 567 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 SLC30A10Q6XR72 485 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 ANKRD33Q7Z3H0 272 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 PDGFCQ9NRA1 345 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 TMEM39AQ9NV64 488 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 ASTN1O14525 1302 aa12.56□□□□□ -0.4
XRCC3-216ENST00000556682 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 ZBTB5O15062 677 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 NKRFO15226 690 aaKnown RBP eCLIP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 RAG1P15918 1043 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 MCM5P33992 734 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 GRM4Q14833 912 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 CHST3Q7LGC8 479 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 STAG2Q8N3U4 1231 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 SCFD2Q8WU76 684 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 MAP3K20Q9NYL2 800 aaKnown RBP12.55□□□□□ -0.4
XRCC3-216ENST00000556682 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
XRCC3-216ENST00000556682 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 RBM47A0AV96 593 aaKnown RBP12.54□□□□□ -0.4
XRCC3-216ENST00000556682 TRIM43BA6NCK2 446 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 ARVCFO00192 962 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 KIAA0355O15063 1070 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 KIF5BP33176 963 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 CPT1AP50416 773 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 BEX3Q00994 111 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 PPP2R5BQ15173 497 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-216ENST00000556682 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-216ENST00000556682 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 BADQ92934 168 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 TRIM43Q96BQ3 446 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-216ENST00000556682 IWS1Q96ST2 819 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
XRCC3-216ENST00000556682 DDX49Q9Y6V7 483 aaKnown RBP12.54□□□□□ -0.4
XRCC3-216ENST00000556682 CCDC69A6NI79 296 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 SLC27A2O14975 620 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CTAGE5O15320 804 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 DDAH1O94760 285 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CFBP00751 764 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 NEFLP07196 543 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 EDNRBP24530 442 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 GNAQP50148 359 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CDK7P50613 346 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 FAAP100Q0VG06 881 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 TROAPQ12815 778 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 STXBP2Q15833 593 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-216ENST00000556682 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 RMDN3Q96TC7 470 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms