RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 ATP6V1C2Q8NEY4 427 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 OXER1Q8TDS5 423 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.03□□□□□ -2.08
KTN1-224ENST00000556631 LRRN4Q8WUT4 740 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 JPH3Q8WXH2 748 aaPredicted RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 EDEM1Q92611 657 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 STMN2Q93045 179 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 GDAP1L1Q96MZ0 367 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 JAKMIP1Q96N16 626 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 BARD1Q99728 777 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 CDADC1Q9BWV3 514 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 MOV10L1Q9BXT6 1211 aaKnown RBP2.03□□□□□ -2.08
KTN1-224ENST00000556631 RNF38Q9H0F5 515 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 KCNK9Q9NPC2 374 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 CNGB3Q9NQW8 809 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 SH3GLB2Q9NR46 395 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 CCDC87Q9NVE4 849 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 FAM86C1Q9NVL1 165 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 FAM8A1Q9UBU6 413 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 GIT1Q9Y2X7 761 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 SPEF1Q9Y4P9 236 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 PCDHGA4Q9Y5G9 962 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 PCDHGA3Q9Y5H0 932 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 PCDHGA1Q9Y5H4 931 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 PMF1-BGLAPU3KQ54 211 aa2.03□□□□□ -2.08
KTN1-224ENST00000556631 RPGRIP1LQ68CZ1 1315 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 VPS37CA5D8V6 355 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 CFAP69A5D8W1 941 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 HMX3A6NHT5 357 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 CCDC169A6NNP5 214 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 M0R2C6 588 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 CASQ2O14958 399 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 MUSKO15146 869 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 HMGB3O15347 200 aaKnown RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 TMCC2O75069 709 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 E2F6O75461 281 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ADCY5O95622 1261 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 SCGB1D2O95969 90 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 GFAPP14136 432 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 FOSL2P15408 326 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 RAG1P15918 1043 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 MSR1P21757 451 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 CAPZA2P47755 286 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 TRPC1P48995 793 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ST13P50502 369 aaKnown RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 ARHGAP4P98171 946 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 APBA1Q02410 837 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 CTDSPL2Q05D32 466 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 SCN1BQ07699 218 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 BLMHQ13867 455 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 EFR3AQ14156 821 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 UGP2Q16851 508 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 UAP1L1Q3KQV9 507 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 PRPF38BQ5VTL8 546 aaKnown RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 TTC19Q6DKK2 380 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 UBE3BQ7Z3V4 1068 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 RD3Q7Z3Z2 195 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 TTC7BQ86TV6 843 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 TRIM69Q86WT6 500 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 SKAP1Q86WV1 359 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 CCDC50Q8IVM0 306 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 LARGE2Q8N3Y3 721 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ZNF527Q8NB42 609 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 UBLCP1Q8WVY7 318 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 C17orf50Q8WW18 174 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ELMO3Q96BJ8 720 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 TUBA1CQ9BQE3 449 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 MMADHCQ9H3L0 296 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 ZNF287Q9HBT7 754 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 NMRK2Q9NPI5 230 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ZNF624Q9P2J8 865 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 LIMD1Q9UGP4 676 aa2.03□□□□□ -2.09
KTN1-224ENST00000556631 ARMCX3Q9UH62 379 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 WBP11Q9Y2W2 641 aaKnown RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 CAB39Q9Y376 341 aaPredicted RBP2.03□□□□□ -2.09
KTN1-224ENST00000556631 ZC3H4Q9UPT8 1303 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 ESYT3A0FGR9 886 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 MYO1BO43795 1136 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 GGPS1O95749 300 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 FECHP22830 423 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 MPSTP25325 297 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 GSTT1P30711 240 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 MAPK4P31152 587 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 CPA2P48052 419 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 AARSP49588 968 aaKnown RBP eCLIP2.02□□□□□ -2.094e-6■■□□□ 13.1
KTN1-224ENST00000556631 MTHFSP49914 203 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 VCPP55072 806 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 FCGRTP55899 365 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 NAA25Q14CX7 972 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 LRRC14Q15048 493 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 BBS9Q3SYG4 887 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PAN2Q504Q3 1202 aaKnown RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 SLC27A3Q5K4L6 730 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 PPP4R3AQ6IN85 833 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 TIGD7Q6NT04 549 aaPredicted RBP2.02□□□□□ -2.09
KTN1-224ENST00000556631 CHADLQ6NUI6 762 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 C11orf88Q6PI97 169 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 CCDC81Q6ZN84 652 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 RRM2BQ7LG56 351 aa2.02□□□□□ -2.09
KTN1-224ENST00000556631 KRT73Q86Y46 540 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms