RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 ERO1AQ96HE7 468 aa14.35□□□□□ -0.11
ABCD4-225ENST00000556517 R3HDMLQ9H3Y0 253 aa14.35□□□□□ -0.11
ABCD4-225ENST00000556517 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
ABCD4-225ENST00000556517 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
ABCD4-225ENST00000556517 KCNJ14Q9UNX9 436 aa14.35□□□□□ -0.11
ABCD4-225ENST00000556517 COL11A1P12107 1806 aaPredicted RBP14.35□□□□□ -0.11
ABCD4-225ENST00000556517 PIK3CDO00329 1044 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
ABCD4-225ENST00000556517 PSMC4P43686 418 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
ABCD4-225ENST00000556517 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 BLIDQ8IZY5 108 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
ABCD4-225ENST00000556517 A1CFQ9NQ94 594 aaKnown RBP14.34□□□□□ -0.11
ABCD4-225ENST00000556517 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
ABCD4-225ENST00000556517 SLC15A5A6NIM6 579 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 POTEB2H3BUK9 544 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 OPLAHO14841 1288 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 STX6O43752 255 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 SYT1P21579 422 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 PTPREP23469 700 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 HSD17B4P51659 736 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 DPP9Q86TI2 863 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
ABCD4-225ENST00000556517 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
ABCD4-225ENST00000556517 CCDC194A0A1B0GVG4 234 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 B4DLN1 442 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 GNRH1P01148 92 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 HOXD10P28358 340 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 ADORA2AP29274 412 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 GHRHRQ02643 423 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 GRB14Q14449 540 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 UBE2SQ16763 222 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 KRT25Q7Z3Z0 450 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 ZNF296Q8WUU4 475 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-225ENST00000556517 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 BIN2Q9UBW5 565 aaPredicted RBP14.32□□□□□ -0.12
ABCD4-225ENST00000556517 MYH6P13533 1939 aa14.32□□□□□ -0.12
ABCD4-225ENST00000556517 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
ABCD4-225ENST00000556517 MEIS2O14770 477 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 PGK2P07205 417 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 CD99L2Q8TCZ2 262 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-225ENST00000556517 TRIM47Q96LD4 638 aa14.31□□□□□ -0.12
ABCD4-225ENST00000556517 FOXP1Q9H334 677 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-225ENST00000556517 BAZ2BQ9UIF8 2168 aaKnown RBP14.3□□□□□ -0.12
ABCD4-225ENST00000556517 BTBD18B2RXH4 712 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 RGS2P41220 211 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 CLK2P49760 499 aaKnown RBP14.3□□□□□ -0.12
ABCD4-225ENST00000556517 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
ABCD4-225ENST00000556517 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 DNERQ8NFT8 737 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 NSUN6Q8TEA1 469 aaKnown RBP14.3□□□□□ -0.12
ABCD4-225ENST00000556517 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
ABCD4-225ENST00000556517 DNAJC25-GNG10A0A024R161 153 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 HSPA1AP0DMV8 641 aaKnown RBP14.29□□□□□ -0.12
ABCD4-225ENST00000556517 HSPA1BP0DMV9 641 aaKnown RBP14.29□□□□□ -0.12
ABCD4-225ENST00000556517 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-225ENST00000556517 NUCB2P80303 420 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 NR5A1Q13285 461 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 NPY5RQ15761 445 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 MORN1Q5T089 497 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 PIK3AP1Q6ZUJ8 805 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 OXER1Q8TDS5 423 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 APBA2Q99767 749 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-225ENST00000556517 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
ABCD4-225ENST00000556517 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
ABCD4-225ENST00000556517 LOC102724159A0A0B4J2E5 919 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 ZSCAN22P10073 491 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-225ENST00000556517 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
ABCD4-225ENST00000556517 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.123e-8■■□□□ 11.6
ABCD4-225ENST00000556517 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 PDE4DQ08499 809 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 PWP2Q15269 919 aaKnown RBP14.28□□□□□ -0.12
ABCD4-225ENST00000556517 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms