RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 FOSP01100 380 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 HOXA13P31271 388 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 MCTP2Q6DN12 878 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 PPP4R3AQ6IN85 833 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 CPXCR1Q8N123 301 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 CLEC4DQ8WXI8 215 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 RLFQ13129 1914 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 LAD1O00515 517 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 KINO60870 393 aaKnown RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 ZBED4O75132 1171 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 TDP2O95551 362 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 CFBP00751 764 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 PRPHP41219 470 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 PPIL2Q13356 520 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 OPTNQ96CV9 577 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 SLC37A4O43826 429 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 NEMFO60524 1076 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 SYKP43405 635 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 USP11P51784 963 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 HOXC10Q9NYD6 342 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 GCOM1H8Y6P7 765 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 NFIBO00712 420 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 POLR2MP0CAP2 368 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 HOXA7P31268 230 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 GJA5P36382 358 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 SREBF1P36956 1147 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 GHRHRQ02643 423 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 MOGSQ13724 837 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 DTHD1Q6ZMT9 781 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 PROCA1Q8NCQ7 364 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 FUCA2Q9BTY2 467 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-206ENST00000556462 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
LINC01550-206ENST00000556462 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 PTPRFP10586 1907 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 PARP14Q460N5 1801 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 ATP2A1O14983 1001 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 OR52Z1P0C646 297 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 ALAS1P13196 640 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 CYP3A7P24462 503 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 LONP1P36776 959 aaKnown RBP12.29□□□□□ -0.44
LINC01550-206ENST00000556462 HSD17B4P51659 736 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
LINC01550-206ENST00000556462 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 PNMA2Q9UL42 364 aa12.29□□□□□ -0.44
LINC01550-206ENST00000556462 A0A087X0B3 334 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 CTAGE5O15320 804 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 ITGBL1O95965 494 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 OAZ1P54368 228 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 FKBP1BP68106 108 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 FCHSD1Q86WN1 690 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 PANK2Q9BZ23 570 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 MYH7BA7E2Y1 1941 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
LINC01550-206ENST00000556462 CYP3A4P08684 503 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 CDC25AP30304 524 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 CALCRLQ16602 461 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 MOXD1Q6UVY6 613 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 HAS1Q92839 578 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 TRERF1Q96PN7 1200 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
LINC01550-206ENST00000556462 GOLGA6L3A6NEY3 463 aa12.27□□□□□ -0.45
LINC01550-206ENST00000556462 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
LINC01550-206ENST00000556462 CIITAP33076 1130 aa12.27□□□□□ -0.45
LINC01550-206ENST00000556462 CST9Q5W186 159 aa12.27□□□□□ -0.45
LINC01550-206ENST00000556462 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms