RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 DUSP11O75319 330 aaKnown RBP13.38□□□□□ -0.27
SLIRP-206ENST00000556375 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 GNAQP50148 359 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
SLIRP-206ENST00000556375 GHRHRQ02643 423 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 RNF180Q86T96 592 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 PIGSQ96S52 555 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
SLIRP-206ENST00000556375 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 KIAA1217Q5T5P2 1943 aa13.38□□□□□ -0.27
SLIRP-206ENST00000556375 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 OPLAHO14841 1288 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 ADCY6O43306 1168 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 PGK1P00558 417 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-206ENST00000556375 EDNRBP24530 442 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-206ENST00000556375 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
SLIRP-206ENST00000556375 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SLIRP-206ENST00000556375 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
SLIRP-206ENST00000556375 DDX49Q9Y6V7 483 aaKnown RBP13.37□□□□□ -0.27
SLIRP-206ENST00000556375 B4DLN1 442 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 H0YGN5 161 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 PLEKHA8P1O95397 391 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 RXRAP19793 462 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-206ENST00000556375 HSD17B4P51659 736 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
SLIRP-206ENST00000556375 LRRC26Q2I0M4 334 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 SYTL5Q8TDW5 730 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-206ENST00000556375 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
SLIRP-206ENST00000556375 SENP6Q9GZR1 1112 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-206ENST00000556375 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 PHF24Q9UPV7 400 aa13.36□□□□□ -0.27
SLIRP-206ENST00000556375 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-206ENST00000556375 CFBP00751 764 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 RCAN1P53805 252 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 GJA9P57773 515 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 PDE4DQ08499 809 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 BLOC1S2Q6QNY1 142 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 EEPD1Q7L9B9 569 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
SLIRP-206ENST00000556375 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
SLIRP-206ENST00000556375 MAP3K20Q9NYL2 800 aaKnown RBP13.35□□□□□ -0.27
SLIRP-206ENST00000556375 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
SLIRP-206ENST00000556375 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
SLIRP-206ENST00000556375 RBM47A0AV96 593 aaKnown RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 ZBTB43O43298 467 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 CPA1P15085 419 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 RPS6KB1P23443 525 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 PSMA5P28066 241 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 NKX3-2P78367 333 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 FGD1P98174 961 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 SNX17Q15036 470 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 NSUN6Q8TEA1 469 aaKnown RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 RMDN3Q96TC7 470 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 PDGFCQ9NRA1 345 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 BRPF3Q9ULD4 1205 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
SLIRP-206ENST00000556375 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
SLIRP-206ENST00000556375 NID2Q14112 1375 aa13.33□□□□□ -0.27
SLIRP-206ENST00000556375 RANBP2P49792 3224 aaKnown RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 KLF18A0A0U1RQI7 1052 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 A0A1W2PQ45 241 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 A0A1W2PQY0 241 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 SMPD1P17405 629 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 CASTP20810 708 aaKnown RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 ACLYP53396 1101 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 RTN1Q16799 776 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
SLIRP-206ENST00000556375 CCSAPQ6IQ19 270 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-206ENST00000556375 SLC39A5Q6ZMH5 540 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms