RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 FAM155AB1AL88 458 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-218ENST00000556343 M0R2N6 131 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 MEIS2O14770 477 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 YEATS4O95619 227 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 CYP2C8P10632 490 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 GCFC2P16383 781 aaKnown RBP10.5□□□□□ -0.73
ACTN1-218ENST00000556343 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 MAP2K2P36507 400 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
ACTN1-218ENST00000556343 HSD17B4P51659 736 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 USP11P51784 963 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 ERVK-24P63145 666 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 STK38Q15208 465 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 NPY5RQ15761 445 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 UBE2SQ16763 222 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 TTC38Q5R3I4 469 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 ANO1Q5XXA6 986 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 NSMFQ6X4W1 530 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 CLEC4DQ8WXI8 215 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 TNFRSF25Q93038 417 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 SPATA32Q96LK8 384 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 PTPN18Q99952 460 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 BTBD7Q9P203 1132 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 TFIP11Q9UBB9 837 aaKnown RBP10.5□□□□□ -0.73
ACTN1-218ENST00000556343 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 OTOFQ9HC10 1997 aa10.5□□□□□ -0.73
ACTN1-218ENST00000556343 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 FIBPO43427 364 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 STRNO43815 780 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 MARCH6O60337 910 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 FCER1AP12319 257 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 MAPK4P31152 587 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 MCM4P33991 863 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 ZNF76P36508 570 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 GHRHRQ02643 423 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 KCTD2Q14681 263 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 FAM110CQ1W6H9 321 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 INF2Q27J81 1249 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 ANKRD13CQ8N6S4 541 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 RASGRP4Q8TDF6 673 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 SHISA4Q96DD7 197 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 MOV10L1Q9BXT6 1211 aaKnown RBP10.49□□□□□ -0.73
ACTN1-218ENST00000556343 ANO3Q9BYT9 981 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 TMEM260Q9NX78 707 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 SLC5A4Q9NY91 659 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
ACTN1-218ENST00000556343 RCOR1Q9UKL0 485 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 IVNS1ABPQ9Y6Y0 642 aa10.49□□□□□ -0.73
ACTN1-218ENST00000556343 LAD1O00515 517 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 NFIBO00712 420 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 SPTLC2O15270 562 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 CA12O43570 354 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 CCNT1O60563 726 aaKnown RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 CNMDO75829 334 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 ERCC3P19447 782 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 HOXA13P31271 388 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 SREBF1P36956 1147 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 RPS6P62753 249 aaKnown RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 ARHGAP4P98171 946 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 CEBPZQ03701 1054 aaKnown RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 BAATQ14032 418 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 SLC39A14Q15043 492 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 ZNF174Q15697 407 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 FAM173BQ6P4H8 233 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 MOXD1Q6UVY6 613 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 DNERQ8NFT8 737 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 NSUN6Q8TEA1 469 aaKnown RBP10.48□□□□□ -0.73
ACTN1-218ENST00000556343 USP28Q96RU2 1077 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 MMP19Q99542 508 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 CNPY2Q9Y2B0 182 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 RIPK3Q9Y572 518 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 ELP1O95163 1332 aa10.48□□□□□ -0.73
ACTN1-218ENST00000556343 MYH6P13533 1939 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 POTEB2H3BUK9 544 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 IGF2BP3O00425 579 aaKnown RBP eCLIP10.47□□□□□ -0.73
ACTN1-218ENST00000556343 TLR2O60603 784 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 PPP6R2O75170 966 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 CYP3A4P08684 503 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 ME1P48163 572 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 NASPP49321 788 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-218ENST00000556343 SKOR2Q2VWA4 1001 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-218ENST00000556343 Q3C1V9 767 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 PPP4R3AQ6IN85 833 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 ABRAQ8N0Z2 381 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 LINC00301Q8NCQ3 95 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 LEO1Q8WVC0 666 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms