RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ARHGAP6O43182 974 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 IDH1O75874 414 aaKnown RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 PTPREP23469 700 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 EPHB1P54762 984 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 UBASH3AP57075 661 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 RAB33AQ14088 237 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 POTEAQ6S8J7 498 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 SPICE1Q8N0Z3 855 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 CRELD1Q96HD1 420 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 CFHR5Q9BXR6 569 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 LUZP4Q9P127 313 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 SIRPGQ9P1W8 387 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 KIAA1551Q9HCM1 1747 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 ERICH2A1L162 156 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 FAM200BP0CF97 657 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 RBP3P10745 1247 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 PHKA1P46020 1223 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 MFSD6Q6ZSS7 791 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 DDX42Q86XP3 938 aaKnown RBP eCLIP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 CCDC89Q8N998 374 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 CNNM3Q8NE01 707 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 NGLY1Q96IV0 654 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 ZIM2Q9NZV7 527 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 ZNF215Q9UL58 517 aaPredicted RBP8.31□□□□□ -1.08
PCNX1-211ENST00000556272 MAST2Q6P0Q8 1798 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 SCN7AQ01118 1682 aa8.31□□□□□ -1.08
PCNX1-211ENST00000556272 BCL9LQ86UU0 1499 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 IFIT3O14879 490 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 PIP5K1CO60331 668 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 APPP05067 770 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 XBP1P17861 261 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MPSTP25325 297 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 CBX1P83916 185 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 PLCB3Q01970 1234 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 HLFQ16534 295 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MICU3Q86XE3 530 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MSL3Q8N5Y2 521 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SPATA20Q8TB22 786 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 ZNF700Q9H0M5 742 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 EPB41L4AQ9HCS5 686 aaPredicted RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 TMEM260Q9NX78 707 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SRPRBQ9Y5M8 271 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 DUOX1Q9NRD9 1551 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 LAMB1P07942 1786 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 ATP8B1O43520 1251 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 STX10O60499 249 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SERPINC1P01008 464 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MYL3P08590 195 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 TOP1P11387 765 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 TBX2Q13207 712 aaPredicted RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 WTAPQ15007 396 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 RTN1Q16799 776 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 KRT222Q8N1A0 295 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MPHOSPH8Q99549 860 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 CENPOQ9BU64 300 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 ZSWIM5Q9P217 1185 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 FBXO2Q9UK22 296 aaPredicted RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SPATA31A1Q5TZJ5 1347 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 GSG1L2A8MUP6 293 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 H2AFXP16104 143 aaPredicted RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 ZNF18P17022 549 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 POSTNQ15063 836 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
PCNX1-211ENST00000556272 TEX19Q8NA77 164 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 DNAI1Q9UI46 699 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 GGT7Q9UJ14 662 aa8.3□□□□□ -1.08
PCNX1-211ENST00000556272 MYH2Q9UKX2 1941 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 FAM177BA6PVY3 158 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 MBD4O95243 580 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 FDX1P10109 184 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 MORC3Q14149 939 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 CRACR2BQ8N4Y2 399 aaPredicted RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 DNAAF2Q9NVR5 837 aaKnown RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 RBM28Q9NW13 759 aaKnown RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 AATFQ9NY61 560 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 BIN1O00499 593 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
PCNX1-211ENST00000556272 CALM1P0DP23 149 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 CALM2P0DP24 149 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 CALM3P0DP25 149 aa8.29□□□□□ -1.08
PCNX1-211ENST00000556272 TUBB4BP68371 445 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms