RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 COPB2P35606 906 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 CCL23P55773 120 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 RAB30Q15771 203 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 C16orf59Q7L2K0 433 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 ANKRD35Q8N283 1001 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 USP17L21D6R901 530 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 ARVCFO00192 962 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 ADCY6O43306 1168 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 SNAI1O95863 264 aaPredicted RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 FGBP02675 491 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 CHGBP05060 677 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 PLA2G5P39877 138 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 TDO2P48775 406 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 RCAN1P53805 252 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 TFF2Q03403 129 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 AKNAD1Q5T1N1 836 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 PPP2R2DQ66LE6 453 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 TNPO1Q92973 898 aaKnown RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 CCDC17Q96LX7 622 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
CHGA-205ENST00000556098 RIPK3Q9Y572 518 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 TCHHQ07283 1943 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 UMODL1Q5DID0 1318 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
CHGA-205ENST00000556098 MYH6P13533 1939 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 REV3LO60673 3130 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 ZBED4O75132 1171 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 BRD1O95696 1058 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
CHGA-205ENST00000556098 MYOGP15173 224 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 MCM4P33991 863 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
CHGA-205ENST00000556098 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
CHGA-205ENST00000556098 Q6ZUG5 572 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 FAM126BQ8IXS8 530 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
CHGA-205ENST00000556098 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
CHGA-205ENST00000556098 ELP1O95163 1332 aa12.86□□□□□ -0.35
CHGA-205ENST00000556098 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 PFKFB2O60825 505 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
CHGA-205ENST00000556098 ME3Q16798 604 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 ARMCX2Q7L311 632 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
CHGA-205ENST00000556098 NID2Q14112 1375 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.84□□□□□ -0.35
CHGA-205ENST00000556098 RFXAPO00287 272 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 NDUFB10O96000 172 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 PTGS1P23219 599 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 LIFRP42702 1097 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 CDK7P50613 346 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 KCNQ1P51787 676 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 CCSAPQ6IQ19 270 aaPredicted RBP12.84□□□□□ -0.35
CHGA-205ENST00000556098 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 EEPD1Q7L9B9 569 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 SCLYQ96I15 445 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms