RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CCDC94Q9BW85 323 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 GTPBP4Q9BZE4 634 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ALDH8A1Q9H2A2 487 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 RAVER2Q9HCJ3 691 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 GPHNQ9NQX3 736 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 FAM217BQ9NTX9 383 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 CYP39A1Q9NYL5 469 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 CHMP5Q9NZZ3 219 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 STX8Q9UNK0 236 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 SNX14Q9Y5W7 946 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 UQCRHLA0A096LP55 91 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 CCDC85CA6NKD9 419 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 UQCRHP07919 91 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 FCER1AP12319 257 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 MSNP26038 577 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 SOX10P56693 466 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 IQCA1Q86XH1 822 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ADGRF4Q8IZF3 695 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 KIFC2Q96AC6 838 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ZFP91Q96JP5 570 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 TMEM87BQ96K49 555 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 MMP19Q99542 508 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 SPZ1Q9BXG8 430 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 UPF3AQ9H1J1 476 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 A1CFQ9NQ94 594 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ZBED4O75132 1171 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 TAL1P17542 331 aaPredicted RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 CYP2B6P20813 491 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 SLC16A2P36021 539 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 HSD17B4P51659 736 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 ATP2B2Q01814 1243 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 RRP12Q5JTH9 1297 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 U2AF1L4Q8WU68 220 aaKnown RBP4.55□□□□□ -1.68
LINC00648-202ENST00000555985 TMEM106CQ9BVX2 250 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 PRO3102Q9H379 93 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 FBXO40Q9UH90 709 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 PNMA2Q9UL42 364 aa4.55□□□□□ -1.68
LINC00648-202ENST00000555985 PFASO15067 1338 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 FRMPD2Q68DX3 1309 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 PRC1O43663 620 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 LETM1O95202 739 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 PGK2P07205 417 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ZKSCAN1P17029 563 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 MCM5P33992 734 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 SNAP25P60880 206 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 UBXN2AP68543 259 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 SNX17Q15036 470 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 IFIT1BQ5T764 474 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TAPT1Q6NXT6 567 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 SAMD3Q8N6K7 520 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 KLHDC9Q8NEP7 349 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TBC1D32Q96NH3 1257 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TRERF1Q96PN7 1200 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TINF2Q9BSI4 451 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TM6SF1Q9BZW5 370 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ACAD9Q9H845 621 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 KAT14Q9H8E8 782 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ZSWIM6Q9HCJ5 1215 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 COL20A1Q9P218 1284 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 NFIBO00712 420 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 SEPT4O43236 478 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ZNF500O60304 480 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ADAMTS4O75173 837 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 PARP1P09874 1014 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 GOLGA8HP0CJ92 632 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 CST5P28325 142 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ATN1P54259 1190 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 TOB2Q14106 344 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 CDC37Q16543 378 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 HS1BP3Q53T59 392 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 C1orf53Q5VUE5 145 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 DHX32Q7L7V1 743 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 CHST3Q7LGC8 479 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 NCAPG2Q86XI2 1143 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ZNF654Q8IZM8 581 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ANP32BQ92688 251 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ZNF830Q96NB3 372 aaPredicted RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 NEK1Q96PY6 1258 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 CPVLQ9H3G5 476 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 GPCPD1Q9NPB8 672 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ANO2Q9NQ90 1003 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 RNF146Q9NTX7 359 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 MAP3K20Q9NYL2 800 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 DDX20Q9UHI6 824 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 GNEQ9Y223 722 aaKnown RBP4.54□□□□□ -1.68
LINC00648-202ENST00000555985 ABCB11O95342 1321 aa4.54□□□□□ -1.68
LINC00648-202ENST00000555985 PIK3CDO00329 1044 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 ZBTB5O15062 677 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 RPS6KB1P23443 525 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 CYP2C19P33261 490 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 CNTN2Q02246 1040 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 WTAPQ15007 396 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 NTRK3Q16288 839 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 QRICH1Q2TAL8 776 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 APOA5Q6Q788 366 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 SLC30A10Q6XR72 485 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 TMTC2Q8N394 836 aa4.53□□□□□ -1.68
LINC00648-202ENST00000555985 SRBD1Q8N5C6 995 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms