RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 MS4A14Q96JA4 679 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 PLCB1Q9NQ66 1216 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 FMN2Q9NZ56 1722 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 IMPDH2P12268 514 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 ATP2A2P16615 1042 aaKnown RBP16.1■□□□□ 0.17
SIX1-205ENST00000555955 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
SIX1-205ENST00000555955 ANTXR2P58335 489 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 BIRC3Q13489 604 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 CUL3Q13618 768 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 SPA17Q15506 151 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 NUGGCQ68CJ6 796 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 TEX9Q8N6V9 391 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
SIX1-205ENST00000555955 C2CD2Q9Y426 696 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 MAST3O60307 1309 aa16.1■□□□□ 0.17
SIX1-205ENST00000555955 SPDYE5A6NIY4 337 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 NCK2O43639 380 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
SIX1-205ENST00000555955 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 LRIG3Q6UXM1 1119 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 AGPAT5Q9NUQ2 364 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 HSD17B3P37058 310 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 MYLK4Q86YV6 388 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 STAMQ92783 540 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 SRPRBQ9Y5M8 271 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 LRRC37A3O60309 1634 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 A0A087X0B3 334 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 NUTM2BA6NNL0 878 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 NUTM2EB1AL46 878 aaPredicted RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 CTNNA1P35221 906 aaKnown RBP16.09■□□□□ 0.17
SIX1-205ENST00000555955 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 TRIM4Q9C037 500 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 AGAP1Q9UPQ3 857 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 PCDHB6Q9Y5E3 794 aa16.09■□□□□ 0.17
SIX1-205ENST00000555955 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.17
SIX1-205ENST00000555955 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 IARSP41252 1262 aaKnown RBP16.08■□□□□ 0.16
SIX1-205ENST00000555955 ZNF844Q08AG5 666 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 HLTFQ14527 1009 aaKnown RBP eCLIP16.08■□□□□ 0.16
SIX1-205ENST00000555955 DNAJC14Q6Y2X3 702 aaPredicted RBP16.08■□□□□ 0.16
SIX1-205ENST00000555955 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 LINS1Q8NG48 757 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 RWDD2AQ9UIY3 292 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 CNGA1P29973 690 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 MAGOHP61326 146 aaKnown RBP16.08■□□□□ 0.16
SIX1-205ENST00000555955 PAK1Q13153 545 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 KCNV2Q8TDN2 545 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 MAGOHBQ96A72 148 aaKnown RBP16.08■□□□□ 0.16
SIX1-205ENST00000555955 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 MON2Q7Z3U7 1717 aa16.08■□□□□ 0.16
SIX1-205ENST00000555955 DCDC2CA8MYV0 355 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 H0YGN5 161 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 ZNF263O14978 683 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 ZSCAN9O15535 394 aaPredicted RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 CTNND1O60716 968 aaKnown RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 TRIM21P19474 475 aaKnown RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 TPP2P29144 1249 aaPredicted RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 ABCD1P33897 745 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 CCDC38Q502W7 563 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 TRPM8Q7Z2W7 1104 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 CCDC42Q96M95 316 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 IFIH1Q9BYX4 1025 aaKnown RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 WDR35Q9P2L0 1181 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 NFS1Q9Y697 457 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 A8MUI8 341 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 KCNQ3O43525 872 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 HOXB7P09629 217 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
SIX1-205ENST00000555955 SH3RF1Q7Z6J0 888 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 MDM1Q8TC05 714 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 NELFBQ8WX92 580 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 PLEKHG4BQ96PX9 1271 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 KRT12Q99456 494 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 PSMD1Q99460 953 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
SIX1-205ENST00000555955 NPTXRO95502 500 aa16.06■□□□□ 0.16
SIX1-205ENST00000555955 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
SIX1-205ENST00000555955 TUBP50607 506 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms