RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 NECAB1Q8N987 351 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 TBC1D16Q8TBP0 767 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 GTF3C6Q969F1 213 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 THAP11Q96EK4 314 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 LLPHQ9BRT6 129 aaKnown RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 AGXT2Q9BYV1 514 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 RNF41Q9H4P4 317 aaPredicted RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 CNNM2Q9H8M5 875 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 MYOZ2Q9NPC6 264 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 DNAAF2Q9NVR5 837 aaKnown RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 NSFL1CQ9UNZ2 370 aaKnown RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 COG5Q9UP83 839 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 NOD1Q9Y239 953 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 ZDHHC9Q9Y397 364 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 MYO15AQ9UKN7 3530 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 GSG1L2A8MUP6 293 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 PRC1O43663 620 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 DHX16O60231 1041 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 UFL1O94874 794 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 ZBTB48P10074 688 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 NCLP19338 710 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 SYT1P21579 422 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 KLRK1P26718 216 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 CLDN10P78369 228 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 APOBRQ0VD83 1088 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 KCNH2Q12809 1159 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 STK3Q13188 491 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 LARP1BQ659C4 914 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 TRAF7Q6Q0C0 670 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 MB21D2Q8IYB1 491 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 AGBL3Q8NEM8 1001 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 TDRD7Q8NHU6 1098 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 HERVK_113Q902F9 699 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 TMEM87BQ96K49 555 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 KRT23Q9C075 422 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 ZFYVE28Q9HCC9 887 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 EVA1BQ9NVM1 165 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 EGFL7Q9UHF1 273 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 NAP1L2Q9ULW6 460 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-204ENST00000555890 SALL1Q9NSC2 1324 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 ZSWIM8A7E2V4 1837 aa7.94□□□□□ -1.14
SLIRP-204ENST00000555890 TCHHQ07283 1943 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 ALPK3Q96L96 1907 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 LDHBP07195 334 aaKnown RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 EVCP57679 992 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 HMGN5P82970 282 aaKnown RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 MECOMQ03112 1051 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 DMWDQ09019 674 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 PKN1Q16512 942 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 PRR23BQ6ZRT6 265 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 MFSD6Q6ZSS7 791 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 DZIP1Q86YF9 867 aaKnown RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 ADSSL1Q8N142 457 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 SIX5Q8N196 739 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 MIGA1Q8NAN2 632 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 FAM184AQ8NB25 1140 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 NSUN4Q96CB9 384 aaKnown RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 TIFAQ96CG3 184 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 WNK4Q96J92 1243 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 OCSTAMPQ9BR26 566 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 MTA3Q9BTC8 594 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 LRRC2Q9BYS8 371 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 CRNKL1Q9BZJ0 848 aaKnown RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 JAG2Q9Y219 1238 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 CACNA1HO95180 2353 aa7.93□□□□□ -1.14
SLIRP-204ENST00000555890 COL1A1P02452 1464 aaPredicted RBP7.93□□□□□ -1.14
SLIRP-204ENST00000555890 BAZ2AQ9UIF9 1905 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ERICH2A1L162 156 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 VPS37CA5D8V6 355 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 WNT10BO00744 389 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 PRKAB2O43741 272 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 BAG3O95817 575 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 F13A1P00488 732 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 SLC3A2P08195 630 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 PCP11498 1178 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 IL1R1P14778 569 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 PDIA3P30101 505 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 NF2P35240 595 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ST3GAL1Q11201 340 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 SCRN1Q12765 414 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 COL9A3Q14050 684 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 SART3Q15020 963 aaKnown RBP7.92□□□□□ -1.14
SLIRP-204ENST00000555890 SYNE3Q6ZMZ3 975 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 CHST3Q7LGC8 479 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ARMC9Q7Z3E5 817 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 TXNRD3Q86VQ6 643 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 CERS3Q8IU89 383 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 TBC1D10CQ8IV04 446 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 TMTC2Q8N394 836 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 ADAM32Q8TC27 787 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 GIPC2Q8TF65 315 aa7.92□□□□□ -1.14
SLIRP-204ENST00000555890 TBC1D22AQ8WUA7 517 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms