RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 CAMTA2O94983 1202 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 GNAI2P04899 355 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 TCIRG1Q13488 830 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 ANGEL2Q5VTE6 544 aaKnown RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 RPAP2Q8IXW5 612 aaPredicted RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 RWDD1Q9H446 243 aaPredicted RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 MBNL3Q9NUK0 354 aaKnown RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 CCNL1Q9UK58 526 aaPredicted RBP7.85□□□□□ -1.15
LINC00643-203ENST00000555518 PCOLCE2Q9UKZ9 415 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 SNX11Q9Y5W9 270 aa7.85□□□□□ -1.15
LINC00643-203ENST00000555518 C4AP0C0L4 1744 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 UBR3Q6ZT12 1888 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 PNMA6EA0A0J9YXQ4 647 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 ERVV-1B6SEH8 477 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 UBTFL1P0CB47 393 aaPredicted RBP7.84□□□□□ -1.15
LINC00643-203ENST00000555518 ATP8B2P98198 1209 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 PDE4CQ08493 712 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 CDK5R2Q13319 367 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 MTX1Q13505 466 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 KIF4BQ2VIQ3 1234 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 EPHA10Q5JZY3 1008 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 SLC23A3Q6PIS1 610 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 SUCLG2Q96I99 432 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 FAM84AQ96KN4 292 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 DNAJC25Q9H1X3 360 aa7.84□□□□□ -1.15
LINC00643-203ENST00000555518 UBN2Q6ZU65 1347 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 PLSCR1O15162 318 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 NDUFB5O43674 189 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 CEACAM5P06731 702 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 NEXNQ0ZGT2 675 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 ZNF124Q15973 351 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 AOC3Q16853 763 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 KIF6Q6ZMV9 814 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 SMIM5Q71RC9 77 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 ZNF34Q8IZ26 560 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 SSH3Q8TE77 659 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 DCTPP1Q9H773 170 aa7.83□□□□□ -1.16
LINC00643-203ENST00000555518 ICMTO60725 284 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 LIG1P18858 919 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 PPP2R3AQ06190 1150 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 RABL6Q3YEC7 729 aaPredicted RBP7.82□□□□□ -1.16
LINC00643-203ENST00000555518 PPP1R42Q7Z4L9 355 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 NLRP10Q86W26 655 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 FAM181AQ8N9Y4 354 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 CCDC191Q8NCU4 936 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 FLAD1Q8NFF5 587 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 JARID2Q92833 1246 aaPredicted RBP7.82□□□□□ -1.16
LINC00643-203ENST00000555518 BICC1Q9H694 974 aaKnown RBP7.82□□□□□ -1.16
LINC00643-203ENST00000555518 CCDC86Q9H6F5 360 aaKnown RBP7.82□□□□□ -1.16
LINC00643-203ENST00000555518 ABCB6Q9NP58 842 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 CWC25Q9NXE8 425 aaPredicted RBP7.82□□□□□ -1.16
LINC00643-203ENST00000555518 TUBGCP6Q96RT7 1819 aa7.82□□□□□ -1.16
LINC00643-203ENST00000555518 COL24A1Q17RW2 1714 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 A0A087WZG4 1122 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 RNGTTO60942 597 aaKnown RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 PCCAP05165 728 aaPredicted RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 GSTP1P09211 210 aaKnown RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 RFX5P48382 616 aaPredicted RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 OXCT1P55809 520 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 FOXO4P98177 505 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 NUCB1Q02818 461 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 ZNF211Q13398 564 aaPredicted RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 TXNRD1Q16881 649 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 UBE3BQ7Z3V4 1068 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 ASB11Q8WXH4 323 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 GCC1Q96CN9 775 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 DUSP23Q9BVJ7 150 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 NPHS2Q9NP85 383 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 DISC1Q9NRI5 854 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 C9orf78Q9NZ63 289 aaPredicted RBP7.81□□□□□ -1.16
LINC00643-203ENST00000555518 ADAMTS6Q9UKP5 1117 aa7.81□□□□□ -1.16
LINC00643-203ENST00000555518 CDHR2Q9BYE9 1310 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 ZNF827Q17R98 1081 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 HSP90AB3PQ58FF7 597 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 CLEC4GQ6UXB4 293 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 CAMKK2Q96RR4 588 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 PLA2G12BQ9BX93 195 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 SRP68Q9UHB9 627 aaKnown RBP7.8□□□□□ -1.16
LINC00643-203ENST00000555518 NARFQ9UHQ1 456 aa7.8□□□□□ -1.16
LINC00643-203ENST00000555518 USP42Q9H9J4 1324 aaKnown RBP7.79□□□□□ -1.16
LINC00643-203ENST00000555518 LAMB2P55268 1798 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 LRP5O75197 1615 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 DDX60Q8IY21 1712 aaKnown RBP7.79□□□□□ -1.16
LINC00643-203ENST00000555518 SRGAP3O43295 1099 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 HMMRO75330 724 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 NTSR2O95665 410 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 GPTP24298 496 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 TTLL4Q14679 1199 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 SUSD4Q5VX71 490 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 CHD1LQ86WJ1 897 aa7.79□□□□□ -1.16
LINC00643-203ENST00000555518 ZSWIM9Q86XI8 627 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms