RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 DLX2Q07687 328 aaPredicted RBP8.12□□□□□ -1.11
VRK1-205ENST00000555402 SEZ6Q53EL9 994 aa8.12□□□□□ -1.11
VRK1-205ENST00000555402 HLA-DQA1Q5Y7H0 255 aa8.12□□□□□ -1.11
VRK1-205ENST00000555402 RBM15Q96T37 977 aaKnown RBP eCLIP8.12□□□□□ -1.11
VRK1-205ENST00000555402 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
VRK1-205ENST00000555402 MKRN2Q9H000 416 aaKnown RBP8.12□□□□□ -1.11
VRK1-205ENST00000555402 RNF38Q9H0F5 515 aa8.12□□□□□ -1.11
VRK1-205ENST00000555402 MCM4P33991 863 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 COL9A2Q14055 689 aaPredicted RBP8.11□□□□□ -1.11
VRK1-205ENST00000555402 DPH6Q7L8W6 267 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 TMEM192Q8IY95 271 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 SLC16A11Q8NCK7 471 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 LNPKQ9C0E8 428 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 ANTXR1Q9H6X2 564 aa8.11□□□□□ -1.11
VRK1-205ENST00000555402 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 FSHBP01225 129 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 NCAM1P13591 858 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 CRKP46108 304 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 PRR5P85299 388 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 AUHQ13825 339 aaKnown RBP8.1□□□□□ -1.11
VRK1-205ENST00000555402 BICRALQ6AI39 1079 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 CARFQ8N187 725 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 NAT16Q8N8M0 369 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 PRR13Q9NZ81 148 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 SRRDQ9UH36 339 aa8.1□□□□□ -1.11
VRK1-205ENST00000555402 F8W031 263 aaPredicted RBP8.09□□□□□ -1.11
VRK1-205ENST00000555402 GSNP06396 782 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 GSTM1P09488 218 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 SOGA3Q5TF21 947 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 CPZQ66K79 652 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 SLC12A9Q9BXP2 914 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 EHMT1Q9H9B1 1298 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 STRIP2Q9ULQ0 834 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
VRK1-205ENST00000555402 C1QTNF3-AMACRE9PGA6 284 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 MC3RP41968 323 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 SOX9P48436 509 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 GJA9P57773 515 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 RBL2Q08999 1139 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 SLITRK4Q8IW52 837 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 CKAP2LQ8IYA6 745 aa8.08□□□□□ -1.12
VRK1-205ENST00000555402 ASGR2P07307 311 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 CCDC81Q6ZN84 652 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 SLC6A18Q96N87 628 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 FERD3LQ96RJ6 166 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
VRK1-205ENST00000555402 NME1P15531 152 aaKnown RBP8.06□□□□□ -1.12
VRK1-205ENST00000555402 ZNF165P49910 485 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 CCDC144BQ3MJ40 725 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 B3GNT8Q7Z7M8 397 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 SORCS2Q96PQ0 1159 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 DSCC1Q9BVC3 393 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 C1QTNF3Q9BXJ4 246 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 SRRTQ9BXP5 876 aaKnown RBP8.06□□□□□ -1.12
VRK1-205ENST00000555402 ZNF408Q9H9D4 720 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 DBR1Q9UK59 544 aaKnown RBP8.06□□□□□ -1.12
VRK1-205ENST00000555402 PPT2Q9UMR5 302 aa8.06□□□□□ -1.12
VRK1-205ENST00000555402 GK5Q6ZS86 529 aa8.05□□□□□ -1.12
VRK1-205ENST00000555402 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
VRK1-205ENST00000555402 R3HCC1Q9Y3T6 440 aaKnown RBP8.05□□□□□ -1.12
VRK1-205ENST00000555402 ZNF20P17024 532 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 ETFBP38117 255 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 SARSP49591 514 aaKnown RBP8.04□□□□□ -1.12
VRK1-205ENST00000555402 CLCQ05315 142 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 CWF19L1Q69YN2 538 aaKnown RBP8.04□□□□□ -1.12
VRK1-205ENST00000555402 C7orf61Q8IZ16 206 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 ALG3Q92685 438 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 LOXL4Q96JB6 756 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 SAMD11Q96NU1 681 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
VRK1-205ENST00000555402 OVOL3O00110 214 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 FGF10O15520 208 aaPredicted RBP8.03□□□□□ -1.12
VRK1-205ENST00000555402 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
VRK1-205ENST00000555402 TACR1P25103 407 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 EIF6P56537 245 aaKnown RBP8.03□□□□□ -1.12
VRK1-205ENST00000555402 CYP2R1Q6VVX0 501 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 ANKS3Q6ZW76 656 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 TTC9BQ8N6N2 239 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
VRK1-205ENST00000555402 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
VRK1-205ENST00000555402 SHOXO15266 292 aa8.02□□□□□ -1.13
VRK1-205ENST00000555402 CORO7P57737 925 aa8.02□□□□□ -1.13
VRK1-205ENST00000555402 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
VRK1-205ENST00000555402 ZNF761Q86XN6 746 aaPredicted RBP8.02□□□□□ -1.13
VRK1-205ENST00000555402 NOX5Q96PH1 765 aa8.02□□□□□ -1.13
VRK1-205ENST00000555402 SPATA6Q9NWH7 488 aaPredicted RBP8.02□□□□□ -1.13
VRK1-205ENST00000555402 NTMQ9P121 344 aa8.02□□□□□ -1.13
VRK1-205ENST00000555402 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
VRK1-205ENST00000555402 SLC9A7Q96T83 725 aa8.01□□□□□ -1.13
VRK1-205ENST00000555402 OSBPL2Q9H1P3 480 aa8.01□□□□□ -1.13
VRK1-205ENST00000555402 H0Y8X5 98 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms