RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-232ENST00000555381 MYD88Q99836 296 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 PBX4Q9BYU1 374 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 RBSNQ9H1K0 784 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
ATXN3-232ENST00000555381 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
ATXN3-232ENST00000555381 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 NDUFB5O43674 189 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 PHACTR2O75167 634 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 GLB1P16278 677 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 RASA3Q14644 834 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 DUSP27Q5VZP5 1158 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 CEP135Q66GS9 1140 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 AGGF1Q8N302 714 aaeCLIP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 TTLL11Q8NHH1 800 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 SNX29Q8TEQ0 813 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 PMEPA1Q969W9 287 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 SPACA7Q96KW9 195 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 CITED4Q96RK1 184 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 POP1Q99575 1024 aaKnown RBP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 METTL22Q9BUU2 404 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 CD209Q9NNX6 404 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 DZANK1Q9NVP4 752 aa6.19□□□□□ -1.42
ATXN3-232ENST00000555381 OAS3Q9Y6K5 1087 aaKnown RBP6.19□□□□□ -1.42
ATXN3-232ENST00000555381 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 CLRN2A0PK11 232 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 GPR182O15218 404 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 DDX58O95786 925 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 GJB1P08034 283 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 CAPN2P17655 700 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 HOXD10P28358 340 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 KCNJ4P48050 445 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 CTSWP56202 376 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 LACTBP83111 547 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 TNFAIP1Q13829 316 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 CFAP100Q494V2 611 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 HHIPQ96QV1 700 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 RBCK1Q9BYM8 510 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 GREM2Q9H772 168 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 VEZTQ9HBM0 779 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 SRA1Q9HD15 236 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 RAXQ9Y2V3 346 aa6.18□□□□□ -1.42
ATXN3-232ENST00000555381 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
ATXN3-232ENST00000555381 LAMB4A4D0S4 1761 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 ANKRD36CQ5JPF3 1778 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 GSC2O15499 205 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 MED26O95402 600 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 TGFB1P01137 390 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 POLR3DP05423 398 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 GJA8P48165 433 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 PEAR1Q5VY43 1037 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 MAP4K3Q8IVH8 894 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 LATS2Q9NRM7 1088 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 BIN2Q9UBW5 565 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 CSADQ9Y600 493 aa6.17□□□□□ -1.42
ATXN3-232ENST00000555381 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-232ENST00000555381 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 SMNDC1O75940 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-232ENST00000555381 IGLV1-40P01703 118 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 PDIA4P13667 645 aaKnown RBP6.16□□□□□ -1.42
ATXN3-232ENST00000555381 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 GRK4P32298 578 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 ORC1Q13415 861 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 SETDB1Q15047 1291 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 Q6ZS46 218 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-232ENST00000555381 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-232ENST00000555381 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms