RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 KRT23Q9C075 422 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 KIAA1217Q5T5P2 1943 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 CHD9Q3L8U1 2897 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 NKRFO15226 690 aaKnown RBP eCLIP10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 KDM4AO75164 1064 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 SMPD1P17405 629 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 ITGB8P26012 769 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 CPT1AP50416 773 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 CLEC4DQ8WXI8 215 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 ZSCAN10Q96SZ4 725 aaPredicted RBP10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 SCN10AQ9Y5Y9 1956 aa10.55□□□□□ -0.72
AC004828.1-201ENST00000555303 CD4P01730 458 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 EDNRBP24530 442 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 RPS6P62753 249 aaKnown RBP10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 BEX3Q00994 111 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 PDE4DQ08499 809 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 BRDTQ58F21 947 aaPredicted RBP10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 TTC22Q5TAA0 569 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 PSRC1Q6PGN9 363 aaPredicted RBP10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 CXCL17Q6UXB2 119 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 SLC30A10Q6XR72 485 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 TMEM199Q8N511 208 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 ENAHQ8N8S7 591 aaPredicted RBP10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 RUFY2Q8WXA3 655 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 TNKSO95271 1327 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 ABCB11O95342 1321 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
AC004828.1-201ENST00000555303 B4E1Z4 1266 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 CALML3P27482 149 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 EPHB4P54760 987 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 PPP2R5BQ15173 497 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 EEPD1Q7L9B9 569 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 GUCD1Q96NT3 240 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 ZKSCAN3Q9BRR0 538 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 WDR11Q9BZH6 1224 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 TRANK1O15050 2925 aa10.53□□□□□ -0.72
AC004828.1-201ENST00000555303 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 KPNA6O60684 536 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 PARP1P09874 1014 aaKnown RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 TRDNQ13061 729 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 TRAF1Q13077 416 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 CDC37Q16543 378 aaPredicted RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 USH1GQ495M9 461 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 IFIT1BQ5T764 474 aaKnown RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 MCF2L2Q86YR7 1114 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 ADGRF4Q8IZF3 695 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 MTIF3Q9H2K0 278 aaKnown RBP10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 HIPK3Q9H422 1215 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 ZSWIM5Q9P217 1185 aa10.52□□□□□ -0.73
AC004828.1-201ENST00000555303 SUPT20HL2P0C7V6 817 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 GOLGA8HP0CJ92 632 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 GSPT1P15170 499 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 DNAJB2P25686 324 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 PDE4AP27815 886 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 PURAQ00577 322 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 TTLL4Q14679 1199 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 RASIP1Q5U651 963 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 OR6J1Q8NGC5 347 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 PURBQ96QR8 312 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 IWS1Q96ST2 819 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 SEMA6BQ9H3T3 888 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 IL23AQ9NPF7 189 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 DDX49Q9Y6V7 483 aaKnown RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 GBF1Q92538 1859 aa10.51□□□□□ -0.73
AC004828.1-201ENST00000555303 A6NJR5 290 aa10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 DHX16O60231 1041 aaKnown RBP10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 PFKMP08237 780 aa10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 CSF2RAP15509 400 aa10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 GHRHRQ02643 423 aa10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 PTPN11Q06124 597 aaPredicted RBP10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 SART3Q15020 963 aaKnown RBP10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 SEC23AQ15436 765 aa10.5□□□□□ -0.73
AC004828.1-201ENST00000555303 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms