RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 SERPINB2P05120 415 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 HOXB7P09629 217 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 DPEP1P16444 411 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 ATP2B1P20020 1258 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 CRKP46108 304 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 PDE4BQ07343 736 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 SEZ6Q53EL9 994 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 ZC3H12AQ5D1E8 599 aaKnown RBP5.38□□□□□ -1.55
CPSF2-204ENST00000555244 WIPI1Q5MNZ9 446 aaPredicted RBP5.38□□□□□ -1.55
CPSF2-204ENST00000555244 TBC1D9BQ66K14 1250 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 C12orf50Q8NA57 414 aaPredicted RBP5.38□□□□□ -1.55
CPSF2-204ENST00000555244 WDR89Q96FK6 387 aaPredicted RBP5.38□□□□□ -1.55
CPSF2-204ENST00000555244 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 PIM2Q9P1W9 311 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 PRKAG2Q9UGJ0 569 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 EFR3BQ9Y2G0 817 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 CARMIL3Q8ND23 1372 aa5.38□□□□□ -1.55
CPSF2-204ENST00000555244 SCN7AQ01118 1682 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 SSBP05455 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 GLB1P16278 677 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 NASPP49321 788 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 ERVK-24P63145 666 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 SOX4Q06945 474 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 PRR5LQ6MZQ0 368 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 LRFN4Q6PJG9 635 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 CPLX3Q8WVH0 158 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 FERD3LQ96RJ6 166 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 THUMPD2Q9BTF0 503 aaKnown RBP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 GINM1Q9NU53 330 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 MIS18AQ9NYP9 233 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 AP4E1Q9UPM8 1137 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 RIC1Q4ADV7 1423 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 ATP10DQ9P241 1426 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 BCORQ6W2J9 1755 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 AFDNP55196 1824 aaKnown RBP5.37□□□□□ -1.55
CPSF2-204ENST00000555244 ARFGEF1Q9Y6D6 1849 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 CEP350Q5VT06 3117 aa5.37□□□□□ -1.55
CPSF2-204ENST00000555244 PRAMEF27A3QJZ7 478 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 DCDC2CA8MYV0 355 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 GFRA2O00451 464 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 FANCGO15287 622 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 TMPRSS2O15393 492 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 SRGNP10124 158 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 ADH5P11766 374 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 IMPDH2P12268 514 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 PDE6BP35913 854 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 SOX9P48436 509 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 INPP5AQ14642 412 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 WDR43Q15061 677 aaKnown RBP eCLIP5.36□□□□□ -1.55
CPSF2-204ENST00000555244 DALRD3Q5D0E6 543 aaKnown RBP5.36□□□□□ -1.55
CPSF2-204ENST00000555244 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.36□□□□□ -1.55
CPSF2-204ENST00000555244 TTLL6Q8N841 843 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 CRBNQ96SW2 442 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 PIDD1Q9HB75 910 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 ZFP64Q9NPA5 681 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 CRIM1Q9NZV1 1036 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 TSPYL4Q9UJ04 414 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 ZNF652Q9Y2D9 606 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 PCDHGC5Q9Y5F6 944 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 CSADQ9Y600 493 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 MAP3K15Q6ZN16 1313 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 IBTKQ9P2D0 1353 aaPredicted RBP5.36□□□□□ -1.55
CPSF2-204ENST00000555244 LAMB4A4D0S4 1761 aa5.36□□□□□ -1.55
CPSF2-204ENST00000555244 N4BP2Q86UW6 1770 aaPredicted RBP5.35□□□□□ -1.55
CPSF2-204ENST00000555244 DLEC1Q9Y238 1755 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 RNF123Q5XPI4 1314 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 H0YIN7 160 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 APAF1O14727 1248 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
CPSF2-204ENST00000555244 TIAF1O95411 115 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 CHRNA5P30532 468 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 ETF1P62495 437 aaKnown RBP5.35□□□□□ -1.55
CPSF2-204ENST00000555244 CALD1Q05682 793 aaKnown RBP5.35□□□□□ -1.55
CPSF2-204ENST00000555244 HLFQ16534 295 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 CRY2Q49AN0 593 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 CCDC184Q52MB2 194 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 SLC10A5Q5PT55 438 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 STYK1Q6J9G0 422 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 PRR23CQ6ZRP0 262 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 GK5Q6ZS86 529 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 CYFIP1Q7L576 1253 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 DYMQ7RTS9 669 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 C12orf40Q86WS4 652 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 ZNF34Q8IZ26 560 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 NGEFQ8N5V2 710 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 KCT2Q8NC54 265 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 UBXN4Q92575 508 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 ARMC5Q96C12 935 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 YIPF2Q9BWQ6 316 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.55
CPSF2-204ENST00000555244 IFT57Q9NWB7 429 aa5.35□□□□□ -1.55
CPSF2-204ENST00000555244 PPP1R9AQ9ULJ8 1098 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms