RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ATP2B1P20020 1258 aa14.17□□□□□ -0.14
PPP4R3A-206ENST00000554943 NONOQ15233 471 aaKnown RBP eCLIP14.17□□□□□ -0.14
PPP4R3A-206ENST00000554943 ASTE1Q2TB18 679 aaPredicted RBP14.17□□□□□ -0.14
PPP4R3A-206ENST00000554943 LRRC55Q6ZSA7 311 aa14.17□□□□□ -0.14
PPP4R3A-206ENST00000554943 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
PPP4R3A-206ENST00000554943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 CDK11BP21127 795 aaKnown RBP14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 STK4Q13043 487 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 HHIPL2Q6UWX4 724 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 CCDC12Q8WUD4 166 aaPredicted RBP14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 DNAJC18Q9H819 358 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 STK17AQ9UEE5 414 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 JAG2Q9Y219 1238 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 KIF20AO95235 890 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 TXLNAP40222 546 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 P2RX5Q93086 422 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 NGLY1Q96IV0 654 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 ATRNL1Q5VV63 1379 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 SLC37A4O43826 429 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 GNA11P29992 359 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 DNAJC19Q96DA6 116 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 IQCDQ96DY2 449 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
PPP4R3A-206ENST00000554943 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 CABP7Q86V35 215 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 SIAH1Q8IUQ4 282 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 CHP1Q99653 195 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 JMJD4Q9H9V9 463 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 NDUFA10O95299 355 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 DNM2P50570 870 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 GNG11P61952 73 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 ECM1Q16610 540 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 WDR93Q6P2C0 686 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 POTEDQ86YR6 584 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 PIGSQ96S52 555 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 MKNK2Q9HBH9 465 aa14.15□□□□□ -0.14
PPP4R3A-206ENST00000554943 RBAK-RBAKDNI3L0D1 243 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 UFL1O94874 794 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 FILIP1LQ4L180 1135 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 BEND6Q5SZJ8 279 aaPredicted RBP14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 TEX11Q8IYF3 940 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 ACRBPQ8NEB7 543 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 PARD6BQ9BYG5 372 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 C6orf50Q9HD87 102 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 TAB2Q9NYJ8 693 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 ZNF263O14978 683 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 SPIRE1Q08AE8 756 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 UNC13DQ70J99 1090 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 SLF2Q8IX21 1173 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 TBCKQ8TEA7 893 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 RRP36Q96EU6 259 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 CCDC151A5D8V7 595 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 EIF3CLB5ME19 914 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 COBLO75128 1261 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 TATDN1Q6P1N9 297 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 HEATR3Q7Z4Q2 680 aa14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 EIF3CQ99613 913 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 SAP30BPQ9UHR5 308 aaKnown RBP14.14□□□□□ -0.15
PPP4R3A-206ENST00000554943 MYMKA6NI61 221 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 CCT6AP40227 531 aaKnown RBP14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 MCCD1P59942 119 aaPredicted RBP14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 MFSD14BQ5SR56 506 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 KLHL10Q6JEL2 608 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 PPFIBP1Q86W92 1011 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 PNMA6FA0A0J9YX94 578 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 AKR1B1P15121 316 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 BRCA1P38398 1863 aaKnown RBP14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 BRD3Q15059 726 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 WHAMMP3Q1A5X7 153 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 GUF1Q8N442 669 aaKnown RBP14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 RAD54LQ92698 747 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 NUP58Q9BVL2 599 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 CPVLQ9H3G5 476 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 RCCD1A6NED2 376 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 URI1O94763 535 aaPredicted RBP14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 ST5P78524 1137 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 BAP1Q92560 729 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 TMEM260Q9NX78 707 aa14.13□□□□□ -0.15
PPP4R3A-206ENST00000554943 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
PPP4R3A-206ENST00000554943 ATP8B3O60423 1300 aa14.12□□□□□ -0.15
PPP4R3A-206ENST00000554943 FCER1AP12319 257 aa14.12□□□□□ -0.15
PPP4R3A-206ENST00000554943 PSMD2Q13200 908 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms