RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 POLD1P28340 1107 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 HDLBPQ00341 1268 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 FMR1Q06787 632 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 TCP10Q12799 353 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 DGKZQ13574 1117 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 KRT32Q14532 448 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 SPTY2D1Q68D10 685 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 SRBD1Q8N5C6 995 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 PHKBQ93100 1093 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 CHMP4CQ96CF2 233 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF274Q96GC6 653 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 P2RX7Q99572 595 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 GLIS2Q9BZE0 524 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 LMBRD1Q9NUN5 540 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 CTNNA3Q9UI47 895 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 ANGEL1Q9UNK9 670 aaKnown RBP6.86□□□□□ -1.31
ATXN3-230ENST00000554673 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
ATXN3-230ENST00000554673 A0A1W2PRG0 241 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 GOLGA8BA8MQT2 603 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 H3BRB1 525 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 SPINT1O43278 529 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 HMGB2P26583 209 aaKnown RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 PSMA5P28066 241 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 MCM4P33991 863 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 MCM5P33992 734 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 EPS15P42566 896 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 RELBQ01201 579 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 GUCY1B3Q02153 619 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF211Q13398 564 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 MRPL58Q14197 206 aaKnown RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 BECN1Q14457 450 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 TMEM67Q5HYA8 995 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 PPP1R26Q5T8A7 1209 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 RNF20Q5VTR2 975 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 PRAMEF18Q5VWM3 479 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 LYPD4Q6UWN0 246 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 SIX5Q8N196 739 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 ARMC2Q8NEN0 867 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 TNFRSF25Q93038 417 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 TEKT1Q969V4 418 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 CEP95Q96GE4 821 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 ZSCAN10Q96SZ4 725 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 TMEM39BQ9GZU3 492 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
ATXN3-230ENST00000554673 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 MAP4K5Q9Y4K4 846 aa6.85□□□□□ -1.31
ATXN3-230ENST00000554673 LRRC37A2A6NM11 1700 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 DOCK5Q9H7D0 1870 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 PHF20L1A8MW92 1017 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 IFIT3O14879 490 aaKnown RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 DDNO94850 711 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 LDHCP07864 332 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 LIFRP42702 1097 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 CTSOP43234 321 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 TFAP4Q01664 338 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 EML3Q32P44 896 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 CIAPIN1Q6FI81 312 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 TATDN1Q6P1N9 297 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 MFSD6Q6ZSS7 791 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 SH3RF1Q7Z6J0 888 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 FERMT3Q86UX7 667 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 MICU3Q86XE3 530 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 NEDD1Q8NHV4 660 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 GPT2Q8TD30 523 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 ZNF592Q92610 1267 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 TMEM47Q9BQJ4 181 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 OCSTAMPQ9BR26 566 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 POLMQ9NP87 494 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 ARPP21Q9UBL0 812 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-230ENST00000554673 MAD2L2Q9UI95 211 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 CNPY2Q9Y2B0 182 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.31
ATXN3-230ENST00000554673 TCP10L2B9ZVM9 353 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 MSTNO14793 375 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 F13A1P00488 732 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 SNHG28P0DPA3 235 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 MAPK1P28482 360 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 USP5P45974 858 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 MCM2P49736 904 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 TOB1P50616 345 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-230ENST00000554673 GSTO1P78417 241 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 ARHGAP4P98171 946 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 GRM4Q14833 912 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 TSNAXIP1Q2TAA8 658 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-230ENST00000554673 TBC1D10BQ4KMP7 808 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-230ENST00000554673 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-230ENST00000554673 TTC6Q86TZ1 520 aa6.83□□□□□ -1.32
ATXN3-230ENST00000554673 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms