RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KIF28PB7ZC32 967 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 H3BQF6 201 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 WDHD1O75717 1129 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF202O95125 648 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TFRCP02786 760 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SLC3A2P08195 630 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PDIA3P30101 505 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 UBASH3AP57075 661 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 HAND2P61296 217 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PTSQ03393 145 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SLC39A6Q13433 755 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PNOCQ13519 176 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 KRT32Q14532 448 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SMC1AQ14683 1233 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ZRSR1Q15695 479 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 MCMDC2Q4G0Z9 681 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TNNI3KQ59H18 835 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SLC27A3Q5K4L6 730 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TEX35Q5T0J7 233 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 WWC2Q6AWC2 1192 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 NAA16Q6N069 864 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 NBPF10Q6P3W6 841 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF530Q6P9A1 599 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TOGARAM2Q6ZUX3 1019 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 DHX32Q7L7V1 743 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 C10orf67Q8IYJ2 551 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 VWA5B2Q8N398 1253 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 LINC00301Q8NCQ3 95 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC150Q8NCX0 1101 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 IPO4Q8TEX9 1081 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ANKRD24Q8TF21 1146 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM74Q96NL1 305 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 AIFM3Q96NN9 605 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 INSM2Q96T92 566 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 NAT10Q9H0A0 1025 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 KANSL2Q9H9L4 492 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 INTS13Q9NVM9 706 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SALL4Q9UJQ4 1053 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 EFR3BQ9Y2G0 817 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 FPGT-TNNI3KV9GXZ4 949 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 E7EWF7 191 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 KIF2AO00139 706 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 GOLIM4O00461 696 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 GREM1O60565 184 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 N4BP1O75113 896 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SERPINC1P01008 464 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PFKFB1P16118 471 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CDC27P30260 824 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 EIF4A3P38919 411 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CTSOP43234 321 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ADKP55263 362 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 NLRP12P59046 1061 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 RAB33AQ14088 237 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 KARSQ15046 597 aaKnown RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 STK38Q15208 465 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PTPROQ16827 1216 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CFAP100Q494V2 611 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 HSP90AB3PQ58FF7 597 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 GNASQ5JWF2 1037 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ADALQ6DHV7 355 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CC2D1AQ6P1N0 951 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 FOXR1Q6PIV2 292 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM139Q8IV31 216 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 STK11IPQ8N1F8 1099 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 LINS1Q8NG48 757 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF296Q8WUU4 475 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF396Q96N95 335 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CLIC6Q96NY7 704 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 MYD88Q99836 296 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 DESI2Q9BSY9 194 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PARD6BQ9BYG5 372 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 UBXN6Q9BZV1 441 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SUGCTQ9HAC7 445 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ABCB6Q9NP58 842 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 BABAM1Q9NWV8 329 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ABI2Q9NYB9 513 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-207ENST00000554439 RTEL1Q9NZ71 1219 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 DENND2AQ9ULE3 1009 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PXDNQ92626 1479 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 PALLDQ8WX93 1383 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 KDM3BQ7LBC6 1761 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 PHLPP2Q6ZVD8 1323 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ABCC6O95255 1503 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MARF1Q9Y4F3 1742 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 A0A1W2PP55 124 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FAM221BA6H8Z2 402 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 NEURL1BA8MQ27 555 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 MINDY4BA8MYZ0 360 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ANKRD65E5RJM6 399 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 UBE2Q2LH0YL09 131 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SPTLC2O15270 562 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 FOXN1O15353 648 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 RNMTO43148 476 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 SPINT1O43278 529 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 XYLBO75191 536 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 HSPD1P10809 573 aaKnown RBP2.92□□□□□ -1.94
PRPF39-207ENST00000554439 ATP5JP18859 108 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 RXRAP19793 462 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 CRKP46108 304 aa2.92□□□□□ -1.94
PRPF39-207ENST00000554439 LMAN1P49257 510 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms