RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 WDR19Q8NEZ3 1342 aa25.69■■□□□ 1.7
RCCD1-202ENST00000554302 PTGS1P23219 599 aa25.69■■□□□ 1.7
RCCD1-202ENST00000554302 ALDH5A1P51649 535 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-202ENST00000554302 CWC27Q6UX04 472 aaKnown RBP25.69■■□□□ 1.7
RCCD1-202ENST00000554302 CXCL17Q6UXB2 119 aa25.69■■□□□ 1.7
RCCD1-202ENST00000554302 NOL8Q76FK4 1167 aaKnown RBP25.69■■□□□ 1.7
RCCD1-202ENST00000554302 EEPD1Q7L9B9 569 aa25.69■■□□□ 1.7
RCCD1-202ENST00000554302 TTYH1Q9H313 450 aaPredicted RBP25.69■■□□□ 1.7
RCCD1-202ENST00000554302 GRIN2DO15399 1336 aa25.68■■□□□ 1.7
RCCD1-202ENST00000554302 DYNC1LI2O43237 492 aaPredicted RBP25.68■■□□□ 1.7
RCCD1-202ENST00000554302 C16orf59Q7L2K0 433 aa25.68■■□□□ 1.7
RCCD1-202ENST00000554302 ANKS1AQ92625 1134 aa25.68■■□□□ 1.7
RCCD1-202ENST00000554302 CDX2Q99626 313 aaPredicted RBP25.68■■□□□ 1.7
RCCD1-202ENST00000554302 AP5M1Q9H0R1 490 aa25.68■■□□□ 1.7
RCCD1-202ENST00000554302 TMEM265A0A087WTH1 108 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 RBM47A0AV96 593 aaKnown RBP25.67■■□□□ 1.7
RCCD1-202ENST00000554302 HIP1O00291 1037 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 DLL1O00548 723 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 TLR3O15455 904 aaKnown RBP25.67■■□□□ 1.7
RCCD1-202ENST00000554302 DUSP28Q4G0W2 176 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 GPATCH4Q5T3I0 446 aaKnown RBP25.67■■□□□ 1.7
RCCD1-202ENST00000554302 SLC30A10Q6XR72 485 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 KIAA1211Q6ZU35 1233 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.67■■□□□ 1.71e-6■■□□□ 14.1
RCCD1-202ENST00000554302 ZKSCAN3Q9BRR0 538 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 DSCC1Q9BVC3 393 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 SEZ6LQ9BYH1 1024 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 DIAPH3Q9NSV4 1193 aa25.67■■□□□ 1.7
RCCD1-202ENST00000554302 PTPDC1A2A3K4 754 aa25.66■■□□□ 1.7
RCCD1-202ENST00000554302 ITGA7Q13683 1181 aa25.66■■□□□ 1.7
RCCD1-202ENST00000554302 ZEB2O60315 1214 aa25.65■■□□□ 1.7
RCCD1-202ENST00000554302 EDNRBP24530 442 aa25.65■■□□□ 1.7
RCCD1-202ENST00000554302 RPS6P62753 249 aaKnown RBP25.65■■□□□ 1.7
RCCD1-202ENST00000554302 PPIGQ13427 754 aaKnown RBP eCLIP25.65■■□□□ 1.78e-9■■□□□ 13.7
RCCD1-202ENST00000554302 CCDC178Q5BJE1 867 aa25.65■■□□□ 1.7
RCCD1-202ENST00000554302 RASIP1Q5U651 963 aa25.65■■□□□ 1.7
RCCD1-202ENST00000554302 RNF207Q6ZRF8 634 aa25.65■■□□□ 1.7
RCCD1-202ENST00000554302 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.64■■□□□ 1.7
RCCD1-202ENST00000554302 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.64■■□□□ 1.7
RCCD1-202ENST00000554302 KDM4AO75164 1064 aa25.64■■□□□ 1.7
RCCD1-202ENST00000554302 CSF2RAP15509 400 aa25.64■■□□□ 1.7
RCCD1-202ENST00000554302 TMEM240Q5SV17 173 aa25.64■■□□□ 1.7
RCCD1-202ENST00000554302 TMEM199Q8N511 208 aa25.64■■□□□ 1.7
RCCD1-202ENST00000554302 RGS22Q8NE09 1264 aa25.64■■□□□ 1.7
RCCD1-202ENST00000554302 GOLGA8HP0CJ92 632 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 CALML3P27482 149 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 IQCA1Q86XH1 822 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 PNMA1Q8ND90 353 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 DNERQ8NFT8 737 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 WDR11Q9BZH6 1224 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 PPP1R12CQ9BZL4 782 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 MAF1Q9H063 256 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 PRUNE2Q8WUY3 3088 aa25.63■■□□□ 1.69
RCCD1-202ENST00000554302 ZSCAN10Q96SZ4 725 aaPredicted RBP25.62■■□□□ 1.69
RCCD1-202ENST00000554302 CPVLQ9H3G5 476 aa25.62■■□□□ 1.69
RCCD1-202ENST00000554302 ZSWIM5Q9P217 1185 aa25.62■■□□□ 1.69
RCCD1-202ENST00000554302 B4E1Z4 1266 aa25.61■■□□□ 1.69
RCCD1-202ENST00000554302 ENAHQ8N8S7 591 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-202ENST00000554302 UBA5Q9GZZ9 404 aa25.61■■□□□ 1.69
RCCD1-202ENST00000554302 CHD9Q3L8U1 2897 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 DNAJB2P25686 324 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 CYP2C18P33260 490 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 PSMC6P62333 389 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 IMMTQ16891 758 aaKnown RBP25.6■■□□□ 1.69
RCCD1-202ENST00000554302 PSRC1Q6PGN9 363 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-202ENST00000554302 MYLIPQ8WY64 445 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 IL25Q9H293 177 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 KAT14Q9H8E8 782 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 CTNNA3Q9UI47 895 aa25.6■■□□□ 1.69
RCCD1-202ENST00000554302 B4GALT4O60513 344 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 PURAQ00577 322 aaKnown RBP25.59■■□□□ 1.69
RCCD1-202ENST00000554302 ZNF365Q70YC5 407 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 MPHOSPH6Q99547 160 aaKnown RBP25.59■■□□□ 1.69
RCCD1-202ENST00000554302 TRPV6Q9H1D0 765 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 HIPK3Q9H422 1215 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 IL23AQ9NPF7 189 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 POLR3EQ9NVU0 708 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 UMODL1Q5DID0 1318 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 CUL9Q8IWT3 2517 aa25.59■■□□□ 1.69
RCCD1-202ENST00000554302 NKRFO15226 690 aaKnown RBP eCLIP25.58■■□□□ 1.69
RCCD1-202ENST00000554302 ACRP10323 421 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 PDE4AP27815 886 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 CPT1AP50416 773 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 PDE4DQ08499 809 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 CDC37Q16543 378 aaPredicted RBP25.58■■□□□ 1.69
RCCD1-202ENST00000554302 USH1GQ495M9 461 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 ASPRV1Q53RT3 343 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.58■■□□□ 1.69
RCCD1-202ENST00000554302 ADGRF4Q8IZF3 695 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 NOC4LQ9BVI4 516 aaKnown RBP25.58■■□□□ 1.69
RCCD1-202ENST00000554302 KRT23Q9C075 422 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 TNKSO95271 1327 aa25.58■■□□□ 1.69
RCCD1-202ENST00000554302 VCANP13611 3396 aa25.58■■□□□ 1.68
RCCD1-202ENST00000554302 SCFD2Q8WU76 684 aa25.57■■□□□ 1.68
RCCD1-202ENST00000554302 HERVK_113Q902F9 699 aa25.57■■□□□ 1.68
RCCD1-202ENST00000554302 ALDH8A1Q9H2A2 487 aaPredicted RBP25.57■■□□□ 1.68
RCCD1-202ENST00000554302 CNNM2Q9H8M5 875 aa25.57■■□□□ 1.68
RCCD1-202ENST00000554302 ABCB11O95342 1321 aa25.57■■□□□ 1.68
RCCD1-202ENST00000554302 GSPT1P15170 499 aaKnown RBP25.56■■□□□ 1.68
RCCD1-202ENST00000554302 OR6J1Q8NGC5 347 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms